Gene : Eucgr.L02859 E. grandis v2.0
Defline:  (1 of 1) KOG3481 - Uncharacterized conserved protein Genomic Order:  2
Name:  ? Eucgr.L02859 Secondary Identifier:  ? PAC:32027541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02859 0.5kb upstream 0.5kb upstream 1868 true scaffold_1504: 5343-7210 Eucalyptus grandis
Eucgr.L02859 0.5kb upstream 0.5kb upstream 500 false scaffold_1504: 5343-5842 Eucalyptus grandis
Eucgr.L02859 0.5kb downstream 0.5kb downstream 1868 true scaffold_1504: 5843-7710 Eucalyptus grandis
Eucgr.L02859 0.5kb downstream 0.5kb downstream 500 false scaffold_1504: 7211-7710 Eucalyptus grandis
Eucgr.L02859 1.0kb upstream 1.0kb upstream 2368 true scaffold_1504: 4843-7210 Eucalyptus grandis
Eucgr.L02859 1.0kb upstream 1.0kb upstream 1000 false scaffold_1504: 4843-5842 Eucalyptus grandis
Eucgr.L02859 1.0kb downstream 1.0kb downstream 2368 true scaffold_1504: 5843-8210 Eucalyptus grandis
Eucgr.L02859 1.0kb downstream 1.0kb downstream 1000 false scaffold_1504: 7211-8210 Eucalyptus grandis
Eucgr.L02859 2.0kb upstream 2.0kb upstream 3368 true scaffold_1504: 3843-7210 Eucalyptus grandis
Eucgr.L02859 2.0kb upstream 2.0kb upstream 2000 false scaffold_1504: 3843-5842 Eucalyptus grandis
Eucgr.L02859 2.0kb downstream 2.0kb downstream 3368 true scaffold_1504: 5843-9210 Eucalyptus grandis
Eucgr.L02859 2.0kb downstream 2.0kb downstream 2000 false scaffold_1504: 7211-9210 Eucalyptus grandis
Eucgr.L02859 5.0kb upstream 5.0kb upstream 6368 true scaffold_1504: 843-7210 Eucalyptus grandis
Eucgr.L02859 5.0kb upstream 5.0kb upstream 5000 false scaffold_1504: 843-5842 Eucalyptus grandis
Eucgr.L02859 5.0kb downstream 5.0kb downstream 4207 true scaffold_1504: 5843-10049 Eucalyptus grandis
Eucgr.L02859 5.0kb downstream 5.0kb downstream 2839 false scaffold_1504: 7211-10049 Eucalyptus grandis
Eucgr.L02859 10.0kb upstream 10.0kb upstream 7210 true scaffold_1504: 1-7210 Eucalyptus grandis
Eucgr.L02859 10.0kb upstream 10.0kb upstream 5842 false scaffold_1504: 1-5842 Eucalyptus grandis
Eucgr.L02859 10.0kb downstream 10.0kb downstream 4207 true scaffold_1504: 5843-10049 Eucalyptus grandis
Eucgr.L02859 10.0kb downstream 10.0kb downstream 2839 false scaffold_1504: 7211-10049 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065636 5270 Rosid View MSA
123737457 5271 Pentapetalae View MSA
122786925 5272 Eudicot View MSA
122043759 5273 Angiosperm View MSA
121347036 5274 Embryophyte View MSA
123380483 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.684565 0.0 2.64812   Low
cufflinks 2.9588 0.0 8.35425    
cufflinks 2.31353 0.0 8.18614    
cufflinks 1.51922 0.0 4.66172    
cufflinks 1.74104 0.0 5.52715    
cufflinks 3.83127 0.0 10.7076   High

0 Strain