Gene : Eucgr.L01227 E. grandis v2.0
Defline:  (1 of 14) PTHR11932//PTHR11932:SF84 - CULLIN Genomic Order:  2
Name:  ? Eucgr.L01227 Secondary Identifier:  ? PAC:32073665
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01227 0.5kb upstream 0.5kb upstream 2023 true scaffold_137: 53364-55386 Eucalyptus grandis
Eucgr.L01227 0.5kb upstream 0.5kb upstream 500 false scaffold_137: 53364-53863 Eucalyptus grandis
Eucgr.L01227 0.5kb downstream 0.5kb downstream 2023 true scaffold_137: 53864-55886 Eucalyptus grandis
Eucgr.L01227 0.5kb downstream 0.5kb downstream 500 false scaffold_137: 55387-55886 Eucalyptus grandis
Eucgr.L01227 1.0kb upstream 1.0kb upstream 2523 true scaffold_137: 52864-55386 Eucalyptus grandis
Eucgr.L01227 1.0kb upstream 1.0kb upstream 1000 false scaffold_137: 52864-53863 Eucalyptus grandis
Eucgr.L01227 1.0kb downstream 1.0kb downstream 2523 true scaffold_137: 53864-56386 Eucalyptus grandis
Eucgr.L01227 1.0kb downstream 1.0kb downstream 1000 false scaffold_137: 55387-56386 Eucalyptus grandis
Eucgr.L01227 2.0kb upstream 2.0kb upstream 3523 true scaffold_137: 51864-55386 Eucalyptus grandis
Eucgr.L01227 2.0kb upstream 2.0kb upstream 2000 false scaffold_137: 51864-53863 Eucalyptus grandis
Eucgr.L01227 2.0kb downstream 2.0kb downstream 3523 true scaffold_137: 53864-57386 Eucalyptus grandis
Eucgr.L01227 2.0kb downstream 2.0kb downstream 2000 false scaffold_137: 55387-57386 Eucalyptus grandis
Eucgr.L01227 5.0kb upstream 5.0kb upstream 6523 true scaffold_137: 48864-55386 Eucalyptus grandis
Eucgr.L01227 5.0kb upstream 5.0kb upstream 5000 false scaffold_137: 48864-53863 Eucalyptus grandis
Eucgr.L01227 5.0kb downstream 5.0kb downstream 6523 true scaffold_137: 53864-60386 Eucalyptus grandis
Eucgr.L01227 5.0kb downstream 5.0kb downstream 5000 false scaffold_137: 55387-60386 Eucalyptus grandis
Eucgr.L01227 10.0kb upstream 10.0kb upstream 11523 true scaffold_137: 43864-55386 Eucalyptus grandis
Eucgr.L01227 10.0kb upstream 10.0kb upstream 10000 false scaffold_137: 43864-53863 Eucalyptus grandis
Eucgr.L01227 10.0kb downstream 10.0kb downstream 11523 true scaffold_137: 53864-65386 Eucalyptus grandis
Eucgr.L01227 10.0kb downstream 10.0kb downstream 10000 false scaffold_137: 55387-65386 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027126 5273 Angiosperm View MSA
124050605 5270 Rosid View MSA
123742728 5271 Pentapetalae View MSA
122770370 5272 Eudicot View MSA
121296825 5274 Embryophyte View MSA
123334939 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.6266 0.0 15.3862    
cufflinks 16.29 0.0 42.6035   High
cufflinks 5.41634 0.0 14.6534   Low
cufflinks 8.12846 0.0 24.7157    
cufflinks 10.3172 0.0 28.6193    
cufflinks 7.30584 0.0 19.535    

0 Strain