Gene : Eucgr.L02800 E. grandis v2.0
Defline:  (1 of 2) 3.4.17.22 - Metallocarboxypeptidase D / Carboxypeptidase D Genomic Order:  2
Name:  ? Eucgr.L02800 Secondary Identifier:  ? PAC:32065725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02800 0.5kb upstream 0.5kb upstream 7134 true scaffold_1415: 3140-10273 Eucalyptus grandis
Eucgr.L02800 0.5kb upstream 0.5kb upstream 500 false scaffold_1415: 9774-10273 Eucalyptus grandis
Eucgr.L02800 0.5kb downstream 0.5kb downstream 7134 true scaffold_1415: 2640-9773 Eucalyptus grandis
Eucgr.L02800 0.5kb downstream 0.5kb downstream 500 false scaffold_1415: 2640-3139 Eucalyptus grandis
Eucgr.L02800 1.0kb upstream 1.0kb upstream 7509 true scaffold_1415: 3140-10648 Eucalyptus grandis
Eucgr.L02800 1.0kb upstream 1.0kb upstream 875 false scaffold_1415: 9774-10648 Eucalyptus grandis
Eucgr.L02800 1.0kb downstream 1.0kb downstream 7634 true scaffold_1415: 2140-9773 Eucalyptus grandis
Eucgr.L02800 1.0kb downstream 1.0kb downstream 1000 false scaffold_1415: 2140-3139 Eucalyptus grandis
Eucgr.L02800 2.0kb upstream 2.0kb upstream 7509 true scaffold_1415: 3140-10648 Eucalyptus grandis
Eucgr.L02800 2.0kb upstream 2.0kb upstream 875 false scaffold_1415: 9774-10648 Eucalyptus grandis
Eucgr.L02800 2.0kb downstream 2.0kb downstream 8634 true scaffold_1415: 1140-9773 Eucalyptus grandis
Eucgr.L02800 2.0kb downstream 2.0kb downstream 2000 false scaffold_1415: 1140-3139 Eucalyptus grandis
Eucgr.L02800 5.0kb upstream 5.0kb upstream 7509 true scaffold_1415: 3140-10648 Eucalyptus grandis
Eucgr.L02800 5.0kb upstream 5.0kb upstream 875 false scaffold_1415: 9774-10648 Eucalyptus grandis
Eucgr.L02800 5.0kb downstream 5.0kb downstream 9773 true scaffold_1415: 1-9773 Eucalyptus grandis
Eucgr.L02800 5.0kb downstream 5.0kb downstream 3139 false scaffold_1415: 1-3139 Eucalyptus grandis
Eucgr.L02800 10.0kb upstream 10.0kb upstream 7509 true scaffold_1415: 3140-10648 Eucalyptus grandis
Eucgr.L02800 10.0kb upstream 10.0kb upstream 875 false scaffold_1415: 9774-10648 Eucalyptus grandis
Eucgr.L02800 10.0kb downstream 10.0kb downstream 9773 true scaffold_1415: 1-9773 Eucalyptus grandis
Eucgr.L02800 10.0kb downstream 10.0kb downstream 3139 false scaffold_1415: 1-3139 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026287 5273 Angiosperm View MSA
124063541 5270 Rosid View MSA
123739796 5271 Pentapetalae View MSA
122793886 5272 Eudicot View MSA
121351102 5274 Embryophyte View MSA
123424980 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.91024 0.0 5.08079    
cufflinks 3.09288 0.0 7.78216    
cufflinks 1.73846 0.0 4.64642    
cufflinks 3.25331 0.0 8.12073    
cufflinks 6.2274 0.0 14.6773   High
cufflinks 0.530186 0.0 1.62574 Low Low

0 Strain