Gene : Eucgr.L02775 E. grandis v2.0
Defline:  (1 of 9) PTHR10264:SF92 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 Genomic Order:  1
Name:  ? Eucgr.L02775 Secondary Identifier:  ? PAC:32052313
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02775 0.5kb upstream 0.5kb upstream 2281 true scaffold_1359: 6587-8867 Eucalyptus grandis
Eucgr.L02775 0.5kb upstream 0.5kb upstream 500 false scaffold_1359: 6587-7086 Eucalyptus grandis
Eucgr.L02775 0.5kb downstream 0.5kb downstream 2281 true scaffold_1359: 7087-9367 Eucalyptus grandis
Eucgr.L02775 0.5kb downstream 0.5kb downstream 500 false scaffold_1359: 8868-9367 Eucalyptus grandis
Eucgr.L02775 1.0kb upstream 1.0kb upstream 2781 true scaffold_1359: 6087-8867 Eucalyptus grandis
Eucgr.L02775 1.0kb upstream 1.0kb upstream 1000 false scaffold_1359: 6087-7086 Eucalyptus grandis
Eucgr.L02775 1.0kb downstream 1.0kb downstream 2781 true scaffold_1359: 7087-9867 Eucalyptus grandis
Eucgr.L02775 1.0kb downstream 1.0kb downstream 1000 false scaffold_1359: 8868-9867 Eucalyptus grandis
Eucgr.L02775 2.0kb upstream 2.0kb upstream 3781 true scaffold_1359: 5087-8867 Eucalyptus grandis
Eucgr.L02775 2.0kb upstream 2.0kb upstream 2000 false scaffold_1359: 5087-7086 Eucalyptus grandis
Eucgr.L02775 2.0kb downstream 2.0kb downstream 3781 true scaffold_1359: 7087-10867 Eucalyptus grandis
Eucgr.L02775 2.0kb downstream 2.0kb downstream 2000 false scaffold_1359: 8868-10867 Eucalyptus grandis
Eucgr.L02775 5.0kb upstream 5.0kb upstream 6781 true scaffold_1359: 2087-8867 Eucalyptus grandis
Eucgr.L02775 5.0kb upstream 5.0kb upstream 5000 false scaffold_1359: 2087-7086 Eucalyptus grandis
Eucgr.L02775 5.0kb downstream 5.0kb downstream 4073 true scaffold_1359: 7087-11159 Eucalyptus grandis
Eucgr.L02775 5.0kb downstream 5.0kb downstream 2292 false scaffold_1359: 8868-11159 Eucalyptus grandis
Eucgr.L02775 10.0kb upstream 10.0kb upstream 8867 true scaffold_1359: 1-8867 Eucalyptus grandis
Eucgr.L02775 10.0kb upstream 10.0kb upstream 7086 false scaffold_1359: 1-7086 Eucalyptus grandis
Eucgr.L02775 10.0kb downstream 10.0kb downstream 4073 true scaffold_1359: 7087-11159 Eucalyptus grandis
Eucgr.L02775 10.0kb downstream 10.0kb downstream 2292 false scaffold_1359: 8868-11159 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027594 5273 Angiosperm View MSA
124052393 5270 Rosid View MSA
123752499 5271 Pentapetalae View MSA
122798658 5272 Eudicot View MSA
121348601 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.83483 0.0 2.69862    
cufflinks 0.699529 0.0 2.28807 Low  
cufflinks 0.649563 0.0 2.16032    
cufflinks 0.99685 0.0 3.11505    
cufflinks 0.13795 0.0 0.620304 Low Low
cufflinks 0.136747 0.0 0.644978 Low Low

0 Strain