Gene : Eucgr.L02773 E. grandis v2.0
Defline:  (1 of 3) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  2
Name:  ? Eucgr.L02773 Secondary Identifier:  ? PAC:32069840
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYCLEAV-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02773 0.5kb upstream 0.5kb upstream 3943 true scaffold_1355: 3854-7796 Eucalyptus grandis
Eucgr.L02773 0.5kb upstream 0.5kb upstream 500 false scaffold_1355: 3854-4353 Eucalyptus grandis
Eucgr.L02773 0.5kb downstream 0.5kb downstream 3943 true scaffold_1355: 4354-8296 Eucalyptus grandis
Eucgr.L02773 0.5kb downstream 0.5kb downstream 500 false scaffold_1355: 7797-8296 Eucalyptus grandis
Eucgr.L02773 1.0kb upstream 1.0kb upstream 4443 true scaffold_1355: 3354-7796 Eucalyptus grandis
Eucgr.L02773 1.0kb upstream 1.0kb upstream 1000 false scaffold_1355: 3354-4353 Eucalyptus grandis
Eucgr.L02773 1.0kb downstream 1.0kb downstream 4443 true scaffold_1355: 4354-8796 Eucalyptus grandis
Eucgr.L02773 1.0kb downstream 1.0kb downstream 1000 false scaffold_1355: 7797-8796 Eucalyptus grandis
Eucgr.L02773 2.0kb upstream 2.0kb upstream 5443 true scaffold_1355: 2354-7796 Eucalyptus grandis
Eucgr.L02773 2.0kb upstream 2.0kb upstream 2000 false scaffold_1355: 2354-4353 Eucalyptus grandis
Eucgr.L02773 2.0kb downstream 2.0kb downstream 5443 true scaffold_1355: 4354-9796 Eucalyptus grandis
Eucgr.L02773 2.0kb downstream 2.0kb downstream 2000 false scaffold_1355: 7797-9796 Eucalyptus grandis
Eucgr.L02773 5.0kb upstream 5.0kb upstream 7796 true scaffold_1355: 1-7796 Eucalyptus grandis
Eucgr.L02773 5.0kb upstream 5.0kb upstream 4353 false scaffold_1355: 1-4353 Eucalyptus grandis
Eucgr.L02773 5.0kb downstream 5.0kb downstream 6714 true scaffold_1355: 4354-11067 Eucalyptus grandis
Eucgr.L02773 5.0kb downstream 5.0kb downstream 3271 false scaffold_1355: 7797-11067 Eucalyptus grandis
Eucgr.L02773 10.0kb upstream 10.0kb upstream 7796 true scaffold_1355: 1-7796 Eucalyptus grandis
Eucgr.L02773 10.0kb upstream 10.0kb upstream 4353 false scaffold_1355: 1-4353 Eucalyptus grandis
Eucgr.L02773 10.0kb downstream 10.0kb downstream 6714 true scaffold_1355: 4354-11067 Eucalyptus grandis
Eucgr.L02773 10.0kb downstream 10.0kb downstream 3271 false scaffold_1355: 7797-11067 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063348 5270 Rosid View MSA
123743205 5271 Pentapetalae View MSA
122791059 5272 Eudicot View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.1536 0.0 82.3658 High  
cufflinks 180.789 0.0 444.935 High High
cufflinks 20.9654 0.0 46.4779   Low
cufflinks 184.809 0.0 457.463 High High
cufflinks 27.3954 0.0 60.5831    
cufflinks 105.587 0.0 246.732 High  

0 Strain