Gene : Eucgr.L02725 E. grandis v2.0
Defline:  (1 of 4) PTHR13073 - GCN5-RELATED Genomic Order:  2
Name:  ? Eucgr.L02725 Secondary Identifier:  ? PAC:32052379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02725 0.5kb upstream 0.5kb upstream 1064 true scaffold_1276: 6082-7145 Eucalyptus grandis
Eucgr.L02725 0.5kb upstream 0.5kb upstream 500 false scaffold_1276: 6082-6581 Eucalyptus grandis
Eucgr.L02725 0.5kb downstream 0.5kb downstream 1064 true scaffold_1276: 6582-7645 Eucalyptus grandis
Eucgr.L02725 0.5kb downstream 0.5kb downstream 500 false scaffold_1276: 7146-7645 Eucalyptus grandis
Eucgr.L02725 1.0kb upstream 1.0kb upstream 1564 true scaffold_1276: 5582-7145 Eucalyptus grandis
Eucgr.L02725 1.0kb upstream 1.0kb upstream 1000 false scaffold_1276: 5582-6581 Eucalyptus grandis
Eucgr.L02725 1.0kb downstream 1.0kb downstream 1564 true scaffold_1276: 6582-8145 Eucalyptus grandis
Eucgr.L02725 1.0kb downstream 1.0kb downstream 1000 false scaffold_1276: 7146-8145 Eucalyptus grandis
Eucgr.L02725 2.0kb upstream 2.0kb upstream 2564 true scaffold_1276: 4582-7145 Eucalyptus grandis
Eucgr.L02725 2.0kb upstream 2.0kb upstream 2000 false scaffold_1276: 4582-6581 Eucalyptus grandis
Eucgr.L02725 2.0kb downstream 2.0kb downstream 2564 true scaffold_1276: 6582-9145 Eucalyptus grandis
Eucgr.L02725 2.0kb downstream 2.0kb downstream 2000 false scaffold_1276: 7146-9145 Eucalyptus grandis
Eucgr.L02725 5.0kb upstream 5.0kb upstream 5564 true scaffold_1276: 1582-7145 Eucalyptus grandis
Eucgr.L02725 5.0kb upstream 5.0kb upstream 5000 false scaffold_1276: 1582-6581 Eucalyptus grandis
Eucgr.L02725 5.0kb downstream 5.0kb downstream 5114 true scaffold_1276: 6582-11695 Eucalyptus grandis
Eucgr.L02725 5.0kb downstream 5.0kb downstream 4550 false scaffold_1276: 7146-11695 Eucalyptus grandis
Eucgr.L02725 10.0kb upstream 10.0kb upstream 7145 true scaffold_1276: 1-7145 Eucalyptus grandis
Eucgr.L02725 10.0kb upstream 10.0kb upstream 6581 false scaffold_1276: 1-6581 Eucalyptus grandis
Eucgr.L02725 10.0kb downstream 10.0kb downstream 5114 true scaffold_1276: 6582-11695 Eucalyptus grandis
Eucgr.L02725 10.0kb downstream 10.0kb downstream 4550 false scaffold_1276: 7146-11695 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067786 5270 Rosid View MSA
123736631 5271 Pentapetalae View MSA
122790924 5272 Eudicot View MSA
122042285 5273 Angiosperm View MSA
121346098 5274 Embryophyte View MSA
123425317 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.40332 0.0 7.47684    
cufflinks 6.02427 0.0 17.0616    
cufflinks 1.91933 0.0 6.21029   Low
cufflinks 4.26259 0.0 12.5421    
cufflinks 16.4559 0.0 42.1633   High
cufflinks 4.8994 0.0 13.8641    

0 Strain