Gene : Eucgr.L02727 E. grandis v2.0
Defline:  (1 of 94) PTHR12411 - CYSTEINE PROTEASE FAMILY C1-RELATED Genomic Order:  1
Name:  ? Eucgr.L02727 Secondary Identifier:  ? PAC:32065775
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02727 0.5kb upstream 0.5kb upstream 2077 true scaffold_1280: 1306-3382 Eucalyptus grandis
Eucgr.L02727 0.5kb upstream 0.5kb upstream 500 false scaffold_1280: 2883-3382 Eucalyptus grandis
Eucgr.L02727 0.5kb downstream 0.5kb downstream 2077 true scaffold_1280: 806-2882 Eucalyptus grandis
Eucgr.L02727 0.5kb downstream 0.5kb downstream 500 false scaffold_1280: 806-1305 Eucalyptus grandis
Eucgr.L02727 1.0kb upstream 1.0kb upstream 2577 true scaffold_1280: 1306-3882 Eucalyptus grandis
Eucgr.L02727 1.0kb upstream 1.0kb upstream 1000 false scaffold_1280: 2883-3882 Eucalyptus grandis
Eucgr.L02727 1.0kb downstream 1.0kb downstream 2577 true scaffold_1280: 306-2882 Eucalyptus grandis
Eucgr.L02727 1.0kb downstream 1.0kb downstream 1000 false scaffold_1280: 306-1305 Eucalyptus grandis
Eucgr.L02727 2.0kb upstream 2.0kb upstream 3577 true scaffold_1280: 1306-4882 Eucalyptus grandis
Eucgr.L02727 2.0kb upstream 2.0kb upstream 2000 false scaffold_1280: 2883-4882 Eucalyptus grandis
Eucgr.L02727 2.0kb downstream 2.0kb downstream 2882 true scaffold_1280: 1-2882 Eucalyptus grandis
Eucgr.L02727 2.0kb downstream 2.0kb downstream 1305 false scaffold_1280: 1-1305 Eucalyptus grandis
Eucgr.L02727 5.0kb upstream 5.0kb upstream 6577 true scaffold_1280: 1306-7882 Eucalyptus grandis
Eucgr.L02727 5.0kb upstream 5.0kb upstream 5000 false scaffold_1280: 2883-7882 Eucalyptus grandis
Eucgr.L02727 5.0kb downstream 5.0kb downstream 2882 true scaffold_1280: 1-2882 Eucalyptus grandis
Eucgr.L02727 5.0kb downstream 5.0kb downstream 1305 false scaffold_1280: 1-1305 Eucalyptus grandis
Eucgr.L02727 10.0kb upstream 10.0kb upstream 10423 true scaffold_1280: 1306-11728 Eucalyptus grandis
Eucgr.L02727 10.0kb upstream 10.0kb upstream 8846 false scaffold_1280: 2883-11728 Eucalyptus grandis
Eucgr.L02727 10.0kb downstream 10.0kb downstream 2882 true scaffold_1280: 1-2882 Eucalyptus grandis
Eucgr.L02727 10.0kb downstream 10.0kb downstream 1305 false scaffold_1280: 1-1305 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030352 5273 Angiosperm View MSA
124051561 5270 Rosid View MSA
123753893 5271 Pentapetalae View MSA
122775321 5272 Eudicot View MSA
121351776 5274 Embryophyte View MSA
123382319 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain