Gene : Eucgr.L02648 E. grandis v2.0
Defline:  (1 of 100) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  1
Name:  ? Eucgr.L02648 Secondary Identifier:  ? PAC:32062525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02648 0.5kb upstream 0.5kb upstream 2792 true scaffold_1159: 3625-6416 Eucalyptus grandis
Eucgr.L02648 0.5kb upstream 0.5kb upstream 500 false scaffold_1159: 3625-4124 Eucalyptus grandis
Eucgr.L02648 0.5kb downstream 0.5kb downstream 2792 true scaffold_1159: 4125-6916 Eucalyptus grandis
Eucgr.L02648 0.5kb downstream 0.5kb downstream 500 false scaffold_1159: 6417-6916 Eucalyptus grandis
Eucgr.L02648 1.0kb upstream 1.0kb upstream 3292 true scaffold_1159: 3125-6416 Eucalyptus grandis
Eucgr.L02648 1.0kb upstream 1.0kb upstream 1000 false scaffold_1159: 3125-4124 Eucalyptus grandis
Eucgr.L02648 1.0kb downstream 1.0kb downstream 3292 true scaffold_1159: 4125-7416 Eucalyptus grandis
Eucgr.L02648 1.0kb downstream 1.0kb downstream 1000 false scaffold_1159: 6417-7416 Eucalyptus grandis
Eucgr.L02648 2.0kb upstream 2.0kb upstream 4292 true scaffold_1159: 2125-6416 Eucalyptus grandis
Eucgr.L02648 2.0kb upstream 2.0kb upstream 2000 false scaffold_1159: 2125-4124 Eucalyptus grandis
Eucgr.L02648 2.0kb downstream 2.0kb downstream 4292 true scaffold_1159: 4125-8416 Eucalyptus grandis
Eucgr.L02648 2.0kb downstream 2.0kb downstream 2000 false scaffold_1159: 6417-8416 Eucalyptus grandis
Eucgr.L02648 5.0kb upstream 5.0kb upstream 6416 true scaffold_1159: 1-6416 Eucalyptus grandis
Eucgr.L02648 5.0kb upstream 5.0kb upstream 4124 false scaffold_1159: 1-4124 Eucalyptus grandis
Eucgr.L02648 5.0kb downstream 5.0kb downstream 7292 true scaffold_1159: 4125-11416 Eucalyptus grandis
Eucgr.L02648 5.0kb downstream 5.0kb downstream 5000 false scaffold_1159: 6417-11416 Eucalyptus grandis
Eucgr.L02648 10.0kb upstream 10.0kb upstream 6416 true scaffold_1159: 1-6416 Eucalyptus grandis
Eucgr.L02648 10.0kb upstream 10.0kb upstream 4124 false scaffold_1159: 1-4124 Eucalyptus grandis
Eucgr.L02648 10.0kb downstream 10.0kb downstream 8460 true scaffold_1159: 4125-12584 Eucalyptus grandis
Eucgr.L02648 10.0kb downstream 10.0kb downstream 6168 false scaffold_1159: 6417-12584 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064928 5270 Rosid View MSA
123742769 5271 Pentapetalae View MSA
122796885 5272 Eudicot View MSA
122048239 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121310900 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 84.9006 0.0 190.54 High  
cufflinks 98.1346 0.0 220.883 High  
cufflinks 92.1058 0.0 206.801 High  
cufflinks 39.5866 0.0 87.6012 High Low
cufflinks 68.483 0.0 152.313 High  
cufflinks 78.3554 0.0 175.763 High  

0 Strain