Gene : Eucgr.L01057 E. grandis v2.0
Defline:  (1 of 4) PTHR10566:SF50 - PROTEIN LACT-3 Genomic Order:  6
Name:  ? Eucgr.L01057 Secondary Identifier:  ? PAC:32052429
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01057 0.5kb upstream 0.5kb upstream 2552 true scaffold_102: 82914-85465 Eucalyptus grandis
Eucgr.L01057 0.5kb upstream 0.5kb upstream 500 false scaffold_102: 84966-85465 Eucalyptus grandis
Eucgr.L01057 0.5kb downstream 0.5kb downstream 2552 true scaffold_102: 82414-84965 Eucalyptus grandis
Eucgr.L01057 0.5kb downstream 0.5kb downstream 500 false scaffold_102: 82414-82913 Eucalyptus grandis
Eucgr.L01057 1.0kb upstream 1.0kb upstream 3052 true scaffold_102: 82914-85965 Eucalyptus grandis
Eucgr.L01057 1.0kb upstream 1.0kb upstream 1000 false scaffold_102: 84966-85965 Eucalyptus grandis
Eucgr.L01057 1.0kb downstream 1.0kb downstream 3052 true scaffold_102: 81914-84965 Eucalyptus grandis
Eucgr.L01057 1.0kb downstream 1.0kb downstream 1000 false scaffold_102: 81914-82913 Eucalyptus grandis
Eucgr.L01057 2.0kb upstream 2.0kb upstream 4052 true scaffold_102: 82914-86965 Eucalyptus grandis
Eucgr.L01057 2.0kb upstream 2.0kb upstream 2000 false scaffold_102: 84966-86965 Eucalyptus grandis
Eucgr.L01057 2.0kb downstream 2.0kb downstream 4052 true scaffold_102: 80914-84965 Eucalyptus grandis
Eucgr.L01057 2.0kb downstream 2.0kb downstream 2000 false scaffold_102: 80914-82913 Eucalyptus grandis
Eucgr.L01057 5.0kb upstream 5.0kb upstream 7052 true scaffold_102: 82914-89965 Eucalyptus grandis
Eucgr.L01057 5.0kb upstream 5.0kb upstream 5000 false scaffold_102: 84966-89965 Eucalyptus grandis
Eucgr.L01057 5.0kb downstream 5.0kb downstream 7052 true scaffold_102: 77914-84965 Eucalyptus grandis
Eucgr.L01057 5.0kb downstream 5.0kb downstream 5000 false scaffold_102: 77914-82913 Eucalyptus grandis
Eucgr.L01057 10.0kb upstream 10.0kb upstream 12052 true scaffold_102: 82914-94965 Eucalyptus grandis
Eucgr.L01057 10.0kb upstream 10.0kb upstream 10000 false scaffold_102: 84966-94965 Eucalyptus grandis
Eucgr.L01057 10.0kb downstream 10.0kb downstream 12052 true scaffold_102: 72914-84965 Eucalyptus grandis
Eucgr.L01057 10.0kb downstream 10.0kb downstream 10000 false scaffold_102: 72914-82913 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028223 5273 Angiosperm View MSA
124051062 5270 Rosid View MSA
123619991 5271 Pentapetalae View MSA
122654412 5272 Eudicot View MSA
121297744 5274 Embryophyte View MSA
123335769 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.54637 0.0 9.74683    
cufflinks 3.03716 0.0 8.40787    
cufflinks 5.35402 0.0 14.1126    
cufflinks 2.16313 0.0 6.23244    
cufflinks 2.78482 0.0 7.81926    
cufflinks 26.3706 0.0 60.2971   High

0 Strain