Gene : Eucgr.L03326 E. grandis v2.0
Defline:  (1 of 3) PTHR11764:SF18 - AMYRIN SYNTHASE LUP2-RELATED Genomic Order:  1
Name:  ? Eucgr.L03326 Secondary Identifier:  ? PAC:32057922
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5203 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03326 0.5kb upstream 0.5kb upstream 5259 true scaffold_2682: 1-5259 Eucalyptus grandis
Eucgr.L03326 0.5kb upstream 0.5kb upstream 56 false scaffold_2682: 1-56 Eucalyptus grandis
Eucgr.L03326 0.5kb downstream 0.5kb downstream 5508 true scaffold_2682: 57-5564 Eucalyptus grandis
Eucgr.L03326 0.5kb downstream 0.5kb downstream 305 false scaffold_2682: 5260-5564 Eucalyptus grandis
Eucgr.L03326 1.0kb upstream 1.0kb upstream 5259 true scaffold_2682: 1-5259 Eucalyptus grandis
Eucgr.L03326 1.0kb upstream 1.0kb upstream 56 false scaffold_2682: 1-56 Eucalyptus grandis
Eucgr.L03326 1.0kb downstream 1.0kb downstream 5508 true scaffold_2682: 57-5564 Eucalyptus grandis
Eucgr.L03326 1.0kb downstream 1.0kb downstream 305 false scaffold_2682: 5260-5564 Eucalyptus grandis
Eucgr.L03326 2.0kb upstream 2.0kb upstream 5259 true scaffold_2682: 1-5259 Eucalyptus grandis
Eucgr.L03326 2.0kb upstream 2.0kb upstream 56 false scaffold_2682: 1-56 Eucalyptus grandis
Eucgr.L03326 2.0kb downstream 2.0kb downstream 5508 true scaffold_2682: 57-5564 Eucalyptus grandis
Eucgr.L03326 2.0kb downstream 2.0kb downstream 305 false scaffold_2682: 5260-5564 Eucalyptus grandis
Eucgr.L03326 5.0kb upstream 5.0kb upstream 5259 true scaffold_2682: 1-5259 Eucalyptus grandis
Eucgr.L03326 5.0kb upstream 5.0kb upstream 56 false scaffold_2682: 1-56 Eucalyptus grandis
Eucgr.L03326 5.0kb downstream 5.0kb downstream 5508 true scaffold_2682: 57-5564 Eucalyptus grandis
Eucgr.L03326 5.0kb downstream 5.0kb downstream 305 false scaffold_2682: 5260-5564 Eucalyptus grandis
Eucgr.L03326 10.0kb upstream 10.0kb upstream 5259 true scaffold_2682: 1-5259 Eucalyptus grandis
Eucgr.L03326 10.0kb upstream 10.0kb upstream 56 false scaffold_2682: 1-56 Eucalyptus grandis
Eucgr.L03326 10.0kb downstream 10.0kb downstream 5508 true scaffold_2682: 57-5564 Eucalyptus grandis
Eucgr.L03326 10.0kb downstream 10.0kb downstream 305 false scaffold_2682: 5260-5564 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791741 5273 Angiosperm View MSA
124062069 5270 Rosid View MSA
123738080 5271 Pentapetalae View MSA
122788516 5272 Eudicot View MSA
121063041 5274 Embryophyte View MSA
123102827 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0104743 0.0 0.0920836 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0148499 0.0 0.112317 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain