Gene : Eucgr.L00548 E. grandis v2.0
Genomic Order:  4 Name:  ? Eucgr.L00548
Secondary Identifier:  ? PAC:32069914
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00548 0.5kb upstream 0.5kb upstream 1475 true scaffold_27: 107169-108643 Eucalyptus grandis
Eucgr.L00548 0.5kb upstream 0.5kb upstream 500 false scaffold_27: 107169-107668 Eucalyptus grandis
Eucgr.L00548 0.5kb downstream 0.5kb downstream 1475 true scaffold_27: 107669-109143 Eucalyptus grandis
Eucgr.L00548 0.5kb downstream 0.5kb downstream 500 false scaffold_27: 108644-109143 Eucalyptus grandis
Eucgr.L00548 1.0kb upstream 1.0kb upstream 1975 true scaffold_27: 106669-108643 Eucalyptus grandis
Eucgr.L00548 1.0kb upstream 1.0kb upstream 1000 false scaffold_27: 106669-107668 Eucalyptus grandis
Eucgr.L00548 1.0kb downstream 1.0kb downstream 1975 true scaffold_27: 107669-109643 Eucalyptus grandis
Eucgr.L00548 1.0kb downstream 1.0kb downstream 1000 false scaffold_27: 108644-109643 Eucalyptus grandis
Eucgr.L00548 2.0kb upstream 2.0kb upstream 2975 true scaffold_27: 105669-108643 Eucalyptus grandis
Eucgr.L00548 2.0kb upstream 2.0kb upstream 2000 false scaffold_27: 105669-107668 Eucalyptus grandis
Eucgr.L00548 2.0kb downstream 2.0kb downstream 2975 true scaffold_27: 107669-110643 Eucalyptus grandis
Eucgr.L00548 2.0kb downstream 2.0kb downstream 2000 false scaffold_27: 108644-110643 Eucalyptus grandis
Eucgr.L00548 5.0kb upstream 5.0kb upstream 5975 true scaffold_27: 102669-108643 Eucalyptus grandis
Eucgr.L00548 5.0kb upstream 5.0kb upstream 5000 false scaffold_27: 102669-107668 Eucalyptus grandis
Eucgr.L00548 5.0kb downstream 5.0kb downstream 5975 true scaffold_27: 107669-113643 Eucalyptus grandis
Eucgr.L00548 5.0kb downstream 5.0kb downstream 5000 false scaffold_27: 108644-113643 Eucalyptus grandis
Eucgr.L00548 10.0kb upstream 10.0kb upstream 10975 true scaffold_27: 97669-108643 Eucalyptus grandis
Eucgr.L00548 10.0kb upstream 10.0kb upstream 10000 false scaffold_27: 97669-107668 Eucalyptus grandis
Eucgr.L00548 10.0kb downstream 10.0kb downstream 10975 true scaffold_27: 107669-118643 Eucalyptus grandis
Eucgr.L00548 10.0kb downstream 10.0kb downstream 10000 false scaffold_27: 108644-118643 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052150 5270 Rosid View MSA
123620435 5271 Pentapetalae View MSA
122654839 5272 Eudicot View MSA
122051645 5273 Angiosperm View MSA
121351232 5274 Embryophyte View MSA
123382069 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.94474 0.0 8.51121    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.82053 0.0 8.2431    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.4683 0.0 35.7159   High
cufflinks 3.71746 0.0 10.4628    

0 Strain