Gene : Eucgr.L03317 E. grandis v2.0
Defline:  (1 of 2) PTHR10848:SF1 - MEIOTIC RECOMBINATION PROTEIN SPO11-2 Genomic Order:  1
Name:  ? Eucgr.L03317 Secondary Identifier:  ? PAC:32052364
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03317 0.5kb upstream 0.5kb upstream 2327 true scaffold_2664: 1-2327 Eucalyptus grandis
Eucgr.L03317 0.5kb upstream 0.5kb upstream 114 false scaffold_2664: 1-114 Eucalyptus grandis
Eucgr.L03317 0.5kb downstream 0.5kb downstream 2713 true scaffold_2664: 115-2827 Eucalyptus grandis
Eucgr.L03317 0.5kb downstream 0.5kb downstream 500 false scaffold_2664: 2328-2827 Eucalyptus grandis
Eucgr.L03317 1.0kb upstream 1.0kb upstream 2327 true scaffold_2664: 1-2327 Eucalyptus grandis
Eucgr.L03317 1.0kb upstream 1.0kb upstream 114 false scaffold_2664: 1-114 Eucalyptus grandis
Eucgr.L03317 1.0kb downstream 1.0kb downstream 3213 true scaffold_2664: 115-3327 Eucalyptus grandis
Eucgr.L03317 1.0kb downstream 1.0kb downstream 1000 false scaffold_2664: 2328-3327 Eucalyptus grandis
Eucgr.L03317 2.0kb upstream 2.0kb upstream 2327 true scaffold_2664: 1-2327 Eucalyptus grandis
Eucgr.L03317 2.0kb upstream 2.0kb upstream 114 false scaffold_2664: 1-114 Eucalyptus grandis
Eucgr.L03317 2.0kb downstream 2.0kb downstream 4213 true scaffold_2664: 115-4327 Eucalyptus grandis
Eucgr.L03317 2.0kb downstream 2.0kb downstream 2000 false scaffold_2664: 2328-4327 Eucalyptus grandis
Eucgr.L03317 5.0kb upstream 5.0kb upstream 2327 true scaffold_2664: 1-2327 Eucalyptus grandis
Eucgr.L03317 5.0kb upstream 5.0kb upstream 114 false scaffold_2664: 1-114 Eucalyptus grandis
Eucgr.L03317 5.0kb downstream 5.0kb downstream 5273 true scaffold_2664: 115-5387 Eucalyptus grandis
Eucgr.L03317 5.0kb downstream 5.0kb downstream 3060 false scaffold_2664: 2328-5387 Eucalyptus grandis
Eucgr.L03317 10.0kb upstream 10.0kb upstream 2327 true scaffold_2664: 1-2327 Eucalyptus grandis
Eucgr.L03317 10.0kb upstream 10.0kb upstream 114 false scaffold_2664: 1-114 Eucalyptus grandis
Eucgr.L03317 10.0kb downstream 10.0kb downstream 5273 true scaffold_2664: 115-5387 Eucalyptus grandis
Eucgr.L03317 10.0kb downstream 10.0kb downstream 3060 false scaffold_2664: 2328-5387 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124046716 5270 Rosid Singleton cluster - no MSA
123749374 5271 Pentapetalae View MSA
122793256 5272 Eudicot View MSA
122044830 5273 Angiosperm View MSA
121350394 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain