Gene : Eucgr.L01575 E. grandis v2.0
Defline:  (1 of 4) PTHR32100:SF10 - OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC Genomic Order:  1
Name:  ? Eucgr.L01575 Secondary Identifier:  ? PAC:32035813
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01575 0.5kb upstream 0.5kb upstream 4784 true scaffold_257: 2227-7010 Eucalyptus grandis
Eucgr.L01575 0.5kb upstream 0.5kb upstream 500 false scaffold_257: 6511-7010 Eucalyptus grandis
Eucgr.L01575 0.5kb downstream 0.5kb downstream 4784 true scaffold_257: 1727-6510 Eucalyptus grandis
Eucgr.L01575 0.5kb downstream 0.5kb downstream 500 false scaffold_257: 1727-2226 Eucalyptus grandis
Eucgr.L01575 1.0kb upstream 1.0kb upstream 5284 true scaffold_257: 2227-7510 Eucalyptus grandis
Eucgr.L01575 1.0kb upstream 1.0kb upstream 1000 false scaffold_257: 6511-7510 Eucalyptus grandis
Eucgr.L01575 1.0kb downstream 1.0kb downstream 5284 true scaffold_257: 1227-6510 Eucalyptus grandis
Eucgr.L01575 1.0kb downstream 1.0kb downstream 1000 false scaffold_257: 1227-2226 Eucalyptus grandis
Eucgr.L01575 2.0kb upstream 2.0kb upstream 6284 true scaffold_257: 2227-8510 Eucalyptus grandis
Eucgr.L01575 2.0kb upstream 2.0kb upstream 2000 false scaffold_257: 6511-8510 Eucalyptus grandis
Eucgr.L01575 2.0kb downstream 2.0kb downstream 6284 true scaffold_257: 227-6510 Eucalyptus grandis
Eucgr.L01575 2.0kb downstream 2.0kb downstream 2000 false scaffold_257: 227-2226 Eucalyptus grandis
Eucgr.L01575 5.0kb upstream 5.0kb upstream 9284 true scaffold_257: 2227-11510 Eucalyptus grandis
Eucgr.L01575 5.0kb upstream 5.0kb upstream 5000 false scaffold_257: 6511-11510 Eucalyptus grandis
Eucgr.L01575 5.0kb downstream 5.0kb downstream 6510 true scaffold_257: 1-6510 Eucalyptus grandis
Eucgr.L01575 5.0kb downstream 5.0kb downstream 2226 false scaffold_257: 1-2226 Eucalyptus grandis
Eucgr.L01575 10.0kb upstream 10.0kb upstream 14284 true scaffold_257: 2227-16510 Eucalyptus grandis
Eucgr.L01575 10.0kb upstream 10.0kb upstream 10000 false scaffold_257: 6511-16510 Eucalyptus grandis
Eucgr.L01575 10.0kb downstream 10.0kb downstream 6510 true scaffold_257: 1-6510 Eucalyptus grandis
Eucgr.L01575 10.0kb downstream 10.0kb downstream 2226 false scaffold_257: 1-2226 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041454 5273 Angiosperm View MSA
124062446 5270 Rosid View MSA
123738012 5271 Pentapetalae View MSA
122787271 5272 Eudicot View MSA
121345501 5274 Embryophyte View MSA
123423794 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 94.6172 0.0 212.616 High  
cufflinks 8.5629 0.0 20.607   Low
cufflinks 84.3511 0.0 188.877 High  
cufflinks 11.2034 0.0 26.2776    
cufflinks 10.6346 0.0 25.1415    
cufflinks 127.3 0.0 289.872 High High

0 Strain