Gene : Eucgr.L00542 E. grandis v2.0
Defline:  (1 of 1) PF00612//PF02179 - IQ calmodulin-binding motif (IQ) // BAG domain (BAG) Genomic Order:  6
Name:  ? Eucgr.L00542 Secondary Identifier:  ? PAC:32040660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00542 0.5kb upstream 0.5kb upstream 1271 true scaffold_26: 362659-363929 Eucalyptus grandis
Eucgr.L00542 0.5kb upstream 0.5kb upstream 500 false scaffold_26: 363430-363929 Eucalyptus grandis
Eucgr.L00542 0.5kb downstream 0.5kb downstream 1271 true scaffold_26: 362159-363429 Eucalyptus grandis
Eucgr.L00542 0.5kb downstream 0.5kb downstream 500 false scaffold_26: 362159-362658 Eucalyptus grandis
Eucgr.L00542 1.0kb upstream 1.0kb upstream 1771 true scaffold_26: 362659-364429 Eucalyptus grandis
Eucgr.L00542 1.0kb upstream 1.0kb upstream 1000 false scaffold_26: 363430-364429 Eucalyptus grandis
Eucgr.L00542 1.0kb downstream 1.0kb downstream 1771 true scaffold_26: 361659-363429 Eucalyptus grandis
Eucgr.L00542 1.0kb downstream 1.0kb downstream 1000 false scaffold_26: 361659-362658 Eucalyptus grandis
Eucgr.L00542 2.0kb upstream 2.0kb upstream 2771 true scaffold_26: 362659-365429 Eucalyptus grandis
Eucgr.L00542 2.0kb upstream 2.0kb upstream 2000 false scaffold_26: 363430-365429 Eucalyptus grandis
Eucgr.L00542 2.0kb downstream 2.0kb downstream 2771 true scaffold_26: 360659-363429 Eucalyptus grandis
Eucgr.L00542 2.0kb downstream 2.0kb downstream 2000 false scaffold_26: 360659-362658 Eucalyptus grandis
Eucgr.L00542 5.0kb upstream 5.0kb upstream 5751 true scaffold_26: 362659-368409 Eucalyptus grandis
Eucgr.L00542 5.0kb upstream 5.0kb upstream 4980 false scaffold_26: 363430-368409 Eucalyptus grandis
Eucgr.L00542 5.0kb downstream 5.0kb downstream 5771 true scaffold_26: 357659-363429 Eucalyptus grandis
Eucgr.L00542 5.0kb downstream 5.0kb downstream 5000 false scaffold_26: 357659-362658 Eucalyptus grandis
Eucgr.L00542 10.0kb upstream 10.0kb upstream 5751 true scaffold_26: 362659-368409 Eucalyptus grandis
Eucgr.L00542 10.0kb upstream 10.0kb upstream 4980 false scaffold_26: 363430-368409 Eucalyptus grandis
Eucgr.L00542 10.0kb downstream 10.0kb downstream 10771 true scaffold_26: 352659-363429 Eucalyptus grandis
Eucgr.L00542 10.0kb downstream 10.0kb downstream 10000 false scaffold_26: 352659-362658 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061385 5270 Rosid View MSA
123751971 5271 Pentapetalae View MSA
122790108 5272 Eudicot View MSA
122046855 5273 Angiosperm View MSA
121348500 5274 Embryophyte View MSA
123380884 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55843 0.0 4.63157    
cufflinks 3.58241 0.0 9.85132   High
cufflinks 0.694563 0.0 2.30233   Low
cufflinks 0.936329 0.0 2.96171    
cufflinks 1.75808 0.0 5.18639    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain