Gene : Eucgr.L01537 E. grandis v2.0
Defline:  (1 of 11) PTHR11607:SF18 - ALPHA-MANNOSIDASE Genomic Order:  2
Name:  ? Eucgr.L01537 Secondary Identifier:  ? PAC:32062534
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01537 0.5kb upstream 0.5kb upstream 10278 true scaffold_240: 44147-54424 Eucalyptus grandis
Eucgr.L01537 0.5kb upstream 0.5kb upstream 500 false scaffold_240: 53925-54424 Eucalyptus grandis
Eucgr.L01537 0.5kb downstream 0.5kb downstream 10278 true scaffold_240: 43647-53924 Eucalyptus grandis
Eucgr.L01537 0.5kb downstream 0.5kb downstream 500 false scaffold_240: 43647-44146 Eucalyptus grandis
Eucgr.L01537 1.0kb upstream 1.0kb upstream 10778 true scaffold_240: 44147-54924 Eucalyptus grandis
Eucgr.L01537 1.0kb upstream 1.0kb upstream 1000 false scaffold_240: 53925-54924 Eucalyptus grandis
Eucgr.L01537 1.0kb downstream 1.0kb downstream 10778 true scaffold_240: 43147-53924 Eucalyptus grandis
Eucgr.L01537 1.0kb downstream 1.0kb downstream 1000 false scaffold_240: 43147-44146 Eucalyptus grandis
Eucgr.L01537 2.0kb upstream 2.0kb upstream 10885 true scaffold_240: 44147-55031 Eucalyptus grandis
Eucgr.L01537 2.0kb upstream 2.0kb upstream 1107 false scaffold_240: 53925-55031 Eucalyptus grandis
Eucgr.L01537 2.0kb downstream 2.0kb downstream 11778 true scaffold_240: 42147-53924 Eucalyptus grandis
Eucgr.L01537 2.0kb downstream 2.0kb downstream 2000 false scaffold_240: 42147-44146 Eucalyptus grandis
Eucgr.L01537 5.0kb upstream 5.0kb upstream 10885 true scaffold_240: 44147-55031 Eucalyptus grandis
Eucgr.L01537 5.0kb upstream 5.0kb upstream 1107 false scaffold_240: 53925-55031 Eucalyptus grandis
Eucgr.L01537 5.0kb downstream 5.0kb downstream 14778 true scaffold_240: 39147-53924 Eucalyptus grandis
Eucgr.L01537 5.0kb downstream 5.0kb downstream 5000 false scaffold_240: 39147-44146 Eucalyptus grandis
Eucgr.L01537 10.0kb upstream 10.0kb upstream 10885 true scaffold_240: 44147-55031 Eucalyptus grandis
Eucgr.L01537 10.0kb upstream 10.0kb upstream 1107 false scaffold_240: 53925-55031 Eucalyptus grandis
Eucgr.L01537 10.0kb downstream 10.0kb downstream 19778 true scaffold_240: 34147-53924 Eucalyptus grandis
Eucgr.L01537 10.0kb downstream 10.0kb downstream 10000 false scaffold_240: 34147-44146 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124048127 5270 Rosid Singleton cluster - no MSA
123745536 5271 Pentapetalae View MSA
122791640 5272 Eudicot View MSA
122044684 5273 Angiosperm View MSA
121351343 5274 Embryophyte View MSA
123424648 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.5024 0.0 6.20674   High
cufflinks 0.611622 0.0 1.7322 Low  
cufflinks 1.31928 0.0 3.47503    
cufflinks 0.278509 0.0 0.861577 Low  
cufflinks 0.013435 0.0 0.0886381 Low Low
cufflinks 0.548164 0.0 1.59487 Low  

0 Strain