Gene : Eucgr.L03237 E. grandis v2.0
Defline:  (1 of 39) PF03101 - FAR1 DNA-binding domain (FAR1) Genomic Order:  1
Name:  ? Eucgr.L03237 Secondary Identifier:  ? PAC:32073658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03237 0.5kb upstream 0.5kb upstream 1171 true scaffold_2401: 4928-6098 Eucalyptus grandis
Eucgr.L03237 0.5kb upstream 0.5kb upstream 500 false scaffold_2401: 5599-6098 Eucalyptus grandis
Eucgr.L03237 0.5kb downstream 0.5kb downstream 1171 true scaffold_2401: 4428-5598 Eucalyptus grandis
Eucgr.L03237 0.5kb downstream 0.5kb downstream 500 false scaffold_2401: 4428-4927 Eucalyptus grandis
Eucgr.L03237 1.0kb upstream 1.0kb upstream 1584 true scaffold_2401: 4928-6511 Eucalyptus grandis
Eucgr.L03237 1.0kb upstream 1.0kb upstream 913 false scaffold_2401: 5599-6511 Eucalyptus grandis
Eucgr.L03237 1.0kb downstream 1.0kb downstream 1671 true scaffold_2401: 3928-5598 Eucalyptus grandis
Eucgr.L03237 1.0kb downstream 1.0kb downstream 1000 false scaffold_2401: 3928-4927 Eucalyptus grandis
Eucgr.L03237 2.0kb upstream 2.0kb upstream 1584 true scaffold_2401: 4928-6511 Eucalyptus grandis
Eucgr.L03237 2.0kb upstream 2.0kb upstream 913 false scaffold_2401: 5599-6511 Eucalyptus grandis
Eucgr.L03237 2.0kb downstream 2.0kb downstream 2671 true scaffold_2401: 2928-5598 Eucalyptus grandis
Eucgr.L03237 2.0kb downstream 2.0kb downstream 2000 false scaffold_2401: 2928-4927 Eucalyptus grandis
Eucgr.L03237 5.0kb upstream 5.0kb upstream 1584 true scaffold_2401: 4928-6511 Eucalyptus grandis
Eucgr.L03237 5.0kb upstream 5.0kb upstream 913 false scaffold_2401: 5599-6511 Eucalyptus grandis
Eucgr.L03237 5.0kb downstream 5.0kb downstream 5598 true scaffold_2401: 1-5598 Eucalyptus grandis
Eucgr.L03237 5.0kb downstream 5.0kb downstream 4927 false scaffold_2401: 1-4927 Eucalyptus grandis
Eucgr.L03237 10.0kb upstream 10.0kb upstream 1584 true scaffold_2401: 4928-6511 Eucalyptus grandis
Eucgr.L03237 10.0kb upstream 10.0kb upstream 913 false scaffold_2401: 5599-6511 Eucalyptus grandis
Eucgr.L03237 10.0kb downstream 10.0kb downstream 5598 true scaffold_2401: 1-5598 Eucalyptus grandis
Eucgr.L03237 10.0kb downstream 10.0kb downstream 4927 false scaffold_2401: 1-4927 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073484 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.13303 0.0 3.86018    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.794515 0.0 2.82142    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain