Gene : Eucgr.L03235 E. grandis v2.0
Defline:  (1 of 1) KOG2561 - Adaptor protein NUB1, contains UBA domain Genomic Order:  1
Name:  ? Eucgr.L03235 Secondary Identifier:  ? PAC:32032046
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03235 0.5kb upstream 0.5kb upstream 5904 true scaffold_2397: 563-6466 Eucalyptus grandis
Eucgr.L03235 0.5kb upstream 0.5kb upstream 447 false scaffold_2397: 6020-6466 Eucalyptus grandis
Eucgr.L03235 0.5kb downstream 0.5kb downstream 5957 true scaffold_2397: 63-6019 Eucalyptus grandis
Eucgr.L03235 0.5kb downstream 0.5kb downstream 500 false scaffold_2397: 63-562 Eucalyptus grandis
Eucgr.L03235 1.0kb upstream 1.0kb upstream 5904 true scaffold_2397: 563-6466 Eucalyptus grandis
Eucgr.L03235 1.0kb upstream 1.0kb upstream 447 false scaffold_2397: 6020-6466 Eucalyptus grandis
Eucgr.L03235 1.0kb downstream 1.0kb downstream 6019 true scaffold_2397: 1-6019 Eucalyptus grandis
Eucgr.L03235 1.0kb downstream 1.0kb downstream 562 false scaffold_2397: 1-562 Eucalyptus grandis
Eucgr.L03235 2.0kb upstream 2.0kb upstream 5904 true scaffold_2397: 563-6466 Eucalyptus grandis
Eucgr.L03235 2.0kb upstream 2.0kb upstream 447 false scaffold_2397: 6020-6466 Eucalyptus grandis
Eucgr.L03235 2.0kb downstream 2.0kb downstream 6019 true scaffold_2397: 1-6019 Eucalyptus grandis
Eucgr.L03235 2.0kb downstream 2.0kb downstream 562 false scaffold_2397: 1-562 Eucalyptus grandis
Eucgr.L03235 5.0kb upstream 5.0kb upstream 5904 true scaffold_2397: 563-6466 Eucalyptus grandis
Eucgr.L03235 5.0kb upstream 5.0kb upstream 447 false scaffold_2397: 6020-6466 Eucalyptus grandis
Eucgr.L03235 5.0kb downstream 5.0kb downstream 6019 true scaffold_2397: 1-6019 Eucalyptus grandis
Eucgr.L03235 5.0kb downstream 5.0kb downstream 562 false scaffold_2397: 1-562 Eucalyptus grandis
Eucgr.L03235 10.0kb upstream 10.0kb upstream 5904 true scaffold_2397: 563-6466 Eucalyptus grandis
Eucgr.L03235 10.0kb upstream 10.0kb upstream 447 false scaffold_2397: 6020-6466 Eucalyptus grandis
Eucgr.L03235 10.0kb downstream 10.0kb downstream 6019 true scaffold_2397: 1-6019 Eucalyptus grandis
Eucgr.L03235 10.0kb downstream 10.0kb downstream 562 false scaffold_2397: 1-562 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064504 5270 Rosid View MSA
123740631 5271 Pentapetalae View MSA
122788504 5272 Eudicot View MSA
122046197 5273 Angiosperm View MSA
123429148 5275 Viridiplantae View MSA
121344011 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.64732 0.0 20.0782    
cufflinks 4.6678 0.0 11.4053    
cufflinks 12.1723 0.0 27.5202    
cufflinks 6.40108 0.0 15.154    
cufflinks 1.33527 0.0 3.7068   Low
cufflinks 15.7218 0.0 35.2799   High

0 Strain