Gene : Eucgr.L03228 E. grandis v2.0
Defline:  (1 of 2) PF07224 - Chlorophyllase (Chlorophyllase) Genomic Order:  1
Name:  ? Eucgr.L03228 Secondary Identifier:  ? PAC:32035867
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5098 Eucalyptus grandis pathologic  
Egrandis PWY-6927 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03228 0.5kb upstream 0.5kb upstream 1187 true scaffold_2358: 1309-2495 Eucalyptus grandis
Eucgr.L03228 0.5kb upstream 0.5kb upstream 500 false scaffold_2358: 1309-1808 Eucalyptus grandis
Eucgr.L03228 0.5kb downstream 0.5kb downstream 1187 true scaffold_2358: 1809-2995 Eucalyptus grandis
Eucgr.L03228 0.5kb downstream 0.5kb downstream 500 false scaffold_2358: 2496-2995 Eucalyptus grandis
Eucgr.L03228 1.0kb upstream 1.0kb upstream 1687 true scaffold_2358: 809-2495 Eucalyptus grandis
Eucgr.L03228 1.0kb upstream 1.0kb upstream 1000 false scaffold_2358: 809-1808 Eucalyptus grandis
Eucgr.L03228 1.0kb downstream 1.0kb downstream 1687 true scaffold_2358: 1809-3495 Eucalyptus grandis
Eucgr.L03228 1.0kb downstream 1.0kb downstream 1000 false scaffold_2358: 2496-3495 Eucalyptus grandis
Eucgr.L03228 2.0kb upstream 2.0kb upstream 2495 true scaffold_2358: 1-2495 Eucalyptus grandis
Eucgr.L03228 2.0kb upstream 2.0kb upstream 1808 false scaffold_2358: 1-1808 Eucalyptus grandis
Eucgr.L03228 2.0kb downstream 2.0kb downstream 2687 true scaffold_2358: 1809-4495 Eucalyptus grandis
Eucgr.L03228 2.0kb downstream 2.0kb downstream 2000 false scaffold_2358: 2496-4495 Eucalyptus grandis
Eucgr.L03228 5.0kb upstream 5.0kb upstream 2495 true scaffold_2358: 1-2495 Eucalyptus grandis
Eucgr.L03228 5.0kb upstream 5.0kb upstream 1808 false scaffold_2358: 1-1808 Eucalyptus grandis
Eucgr.L03228 5.0kb downstream 5.0kb downstream 4787 true scaffold_2358: 1809-6595 Eucalyptus grandis
Eucgr.L03228 5.0kb downstream 5.0kb downstream 4100 false scaffold_2358: 2496-6595 Eucalyptus grandis
Eucgr.L03228 10.0kb upstream 10.0kb upstream 2495 true scaffold_2358: 1-2495 Eucalyptus grandis
Eucgr.L03228 10.0kb upstream 10.0kb upstream 1808 false scaffold_2358: 1-1808 Eucalyptus grandis
Eucgr.L03228 10.0kb downstream 10.0kb downstream 4787 true scaffold_2358: 1809-6595 Eucalyptus grandis
Eucgr.L03228 10.0kb downstream 10.0kb downstream 4100 false scaffold_2358: 2496-6595 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065690 5270 Rosid View MSA
123737382 5271 Pentapetalae View MSA
122788570 5272 Eudicot View MSA
122043389 5273 Angiosperm View MSA
121344751 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4394 0.0 31.4801    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.87511 0.0 13.7194    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain