Gene : Eucgr.L03173 E. grandis v2.0
Defline:  (1 of 10) PTHR11003//PTHR11003:SF121 - POTASSIUM CHANNEL, SUBFAMILY K Genomic Order:  2
Name:  ? Eucgr.L03173 Secondary Identifier:  ? PAC:32027795
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03173 0.5kb upstream 0.5kb upstream 1312 true scaffold_2185: 5789-7100 Eucalyptus grandis
Eucgr.L03173 0.5kb upstream 0.5kb upstream 143 false scaffold_2185: 6958-7100 Eucalyptus grandis
Eucgr.L03173 0.5kb downstream 0.5kb downstream 1669 true scaffold_2185: 5289-6957 Eucalyptus grandis
Eucgr.L03173 0.5kb downstream 0.5kb downstream 500 false scaffold_2185: 5289-5788 Eucalyptus grandis
Eucgr.L03173 1.0kb upstream 1.0kb upstream 1312 true scaffold_2185: 5789-7100 Eucalyptus grandis
Eucgr.L03173 1.0kb upstream 1.0kb upstream 143 false scaffold_2185: 6958-7100 Eucalyptus grandis
Eucgr.L03173 1.0kb downstream 1.0kb downstream 2169 true scaffold_2185: 4789-6957 Eucalyptus grandis
Eucgr.L03173 1.0kb downstream 1.0kb downstream 1000 false scaffold_2185: 4789-5788 Eucalyptus grandis
Eucgr.L03173 2.0kb upstream 2.0kb upstream 1312 true scaffold_2185: 5789-7100 Eucalyptus grandis
Eucgr.L03173 2.0kb upstream 2.0kb upstream 143 false scaffold_2185: 6958-7100 Eucalyptus grandis
Eucgr.L03173 2.0kb downstream 2.0kb downstream 3169 true scaffold_2185: 3789-6957 Eucalyptus grandis
Eucgr.L03173 2.0kb downstream 2.0kb downstream 2000 false scaffold_2185: 3789-5788 Eucalyptus grandis
Eucgr.L03173 5.0kb upstream 5.0kb upstream 1312 true scaffold_2185: 5789-7100 Eucalyptus grandis
Eucgr.L03173 5.0kb upstream 5.0kb upstream 143 false scaffold_2185: 6958-7100 Eucalyptus grandis
Eucgr.L03173 5.0kb downstream 5.0kb downstream 6169 true scaffold_2185: 789-6957 Eucalyptus grandis
Eucgr.L03173 5.0kb downstream 5.0kb downstream 5000 false scaffold_2185: 789-5788 Eucalyptus grandis
Eucgr.L03173 10.0kb upstream 10.0kb upstream 1312 true scaffold_2185: 5789-7100 Eucalyptus grandis
Eucgr.L03173 10.0kb upstream 10.0kb upstream 143 false scaffold_2185: 6958-7100 Eucalyptus grandis
Eucgr.L03173 10.0kb downstream 10.0kb downstream 6957 true scaffold_2185: 1-6957 Eucalyptus grandis
Eucgr.L03173 10.0kb downstream 10.0kb downstream 5788 false scaffold_2185: 1-5788 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070017 5270 Rosid View MSA
123748473 5271 Pentapetalae View MSA
122795341 5272 Eudicot View MSA
122044893 5273 Angiosperm View MSA
121351714 5274 Embryophyte View MSA
123382287 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.26499 0.0 0.990868 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.305398 0.0 1.11776 Low  
cufflinks 0.235151 0.0 0.885987 Low  
cufflinks 1.05002 0.0 3.25346   High
cufflinks 0.746056 0.0 2.45097 Low  

0 Strain