Gene : Eucgr.L03176 E. grandis v2.0
Defline:  (1 of 2) 3.5.99.10 - 2-iminobutanoate/2-iminopropanoate deaminase / Enamine/imine deaminase Genomic Order:  1
Name:  ? Eucgr.L03176 Secondary Identifier:  ? PAC:32062335
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1535 Eucalyptus grandis pathologic  
Egrandis PWY-6196 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03176 0.5kb upstream 0.5kb upstream 3385 true scaffold_2199: 3196-6580 Eucalyptus grandis
Eucgr.L03176 0.5kb upstream 0.5kb upstream 500 false scaffold_2199: 3196-3695 Eucalyptus grandis
Eucgr.L03176 0.5kb downstream 0.5kb downstream 3335 true scaffold_2199: 3696-7030 Eucalyptus grandis
Eucgr.L03176 0.5kb downstream 0.5kb downstream 450 false scaffold_2199: 6581-7030 Eucalyptus grandis
Eucgr.L03176 1.0kb upstream 1.0kb upstream 3885 true scaffold_2199: 2696-6580 Eucalyptus grandis
Eucgr.L03176 1.0kb upstream 1.0kb upstream 1000 false scaffold_2199: 2696-3695 Eucalyptus grandis
Eucgr.L03176 1.0kb downstream 1.0kb downstream 3335 true scaffold_2199: 3696-7030 Eucalyptus grandis
Eucgr.L03176 1.0kb downstream 1.0kb downstream 450 false scaffold_2199: 6581-7030 Eucalyptus grandis
Eucgr.L03176 2.0kb upstream 2.0kb upstream 4885 true scaffold_2199: 1696-6580 Eucalyptus grandis
Eucgr.L03176 2.0kb upstream 2.0kb upstream 2000 false scaffold_2199: 1696-3695 Eucalyptus grandis
Eucgr.L03176 2.0kb downstream 2.0kb downstream 3335 true scaffold_2199: 3696-7030 Eucalyptus grandis
Eucgr.L03176 2.0kb downstream 2.0kb downstream 450 false scaffold_2199: 6581-7030 Eucalyptus grandis
Eucgr.L03176 5.0kb upstream 5.0kb upstream 6580 true scaffold_2199: 1-6580 Eucalyptus grandis
Eucgr.L03176 5.0kb upstream 5.0kb upstream 3695 false scaffold_2199: 1-3695 Eucalyptus grandis
Eucgr.L03176 5.0kb downstream 5.0kb downstream 3335 true scaffold_2199: 3696-7030 Eucalyptus grandis
Eucgr.L03176 5.0kb downstream 5.0kb downstream 450 false scaffold_2199: 6581-7030 Eucalyptus grandis
Eucgr.L03176 10.0kb upstream 10.0kb upstream 6580 true scaffold_2199: 1-6580 Eucalyptus grandis
Eucgr.L03176 10.0kb upstream 10.0kb upstream 3695 false scaffold_2199: 1-3695 Eucalyptus grandis
Eucgr.L03176 10.0kb downstream 10.0kb downstream 3335 true scaffold_2199: 3696-7030 Eucalyptus grandis
Eucgr.L03176 10.0kb downstream 10.0kb downstream 450 false scaffold_2199: 6581-7030 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062452 5270 Rosid View MSA
123747425 5271 Pentapetalae View MSA
122788697 5272 Eudicot View MSA
122047773 5273 Angiosperm View MSA
121349412 5274 Embryophyte View MSA
123426885 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.8336 0.0 75.6875 High  
cufflinks 25.9166 0.0 58.716   Low
cufflinks 35.5317 0.0 79.3974 High  
cufflinks 29.7971 0.0 67.0981    
cufflinks 31.4334 0.0 70.5575    
cufflinks 39.8886 0.0 88.69 High High

0 Strain