Gene : Eucgr.L01457 E. grandis v2.0
Defline:  (1 of 3) PTHR10809:SF59 - VESICLE-ASSOCIATED PROTEIN 2-2 Genomic Order:  2
Name:  ? Eucgr.L01457 Secondary Identifier:  ? PAC:32049300
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01457 0.5kb upstream 0.5kb upstream 1488 true scaffold_215: 53011-54498 Eucalyptus grandis
Eucgr.L01457 0.5kb upstream 0.5kb upstream 500 false scaffold_215: 53999-54498 Eucalyptus grandis
Eucgr.L01457 0.5kb downstream 0.5kb downstream 1488 true scaffold_215: 52511-53998 Eucalyptus grandis
Eucgr.L01457 0.5kb downstream 0.5kb downstream 500 false scaffold_215: 52511-53010 Eucalyptus grandis
Eucgr.L01457 1.0kb upstream 1.0kb upstream 1988 true scaffold_215: 53011-54998 Eucalyptus grandis
Eucgr.L01457 1.0kb upstream 1.0kb upstream 1000 false scaffold_215: 53999-54998 Eucalyptus grandis
Eucgr.L01457 1.0kb downstream 1.0kb downstream 1988 true scaffold_215: 52011-53998 Eucalyptus grandis
Eucgr.L01457 1.0kb downstream 1.0kb downstream 1000 false scaffold_215: 52011-53010 Eucalyptus grandis
Eucgr.L01457 2.0kb upstream 2.0kb upstream 2988 true scaffold_215: 53011-55998 Eucalyptus grandis
Eucgr.L01457 2.0kb upstream 2.0kb upstream 2000 false scaffold_215: 53999-55998 Eucalyptus grandis
Eucgr.L01457 2.0kb downstream 2.0kb downstream 2988 true scaffold_215: 51011-53998 Eucalyptus grandis
Eucgr.L01457 2.0kb downstream 2.0kb downstream 2000 false scaffold_215: 51011-53010 Eucalyptus grandis
Eucgr.L01457 5.0kb upstream 5.0kb upstream 5988 true scaffold_215: 53011-58998 Eucalyptus grandis
Eucgr.L01457 5.0kb upstream 5.0kb upstream 5000 false scaffold_215: 53999-58998 Eucalyptus grandis
Eucgr.L01457 5.0kb downstream 5.0kb downstream 5988 true scaffold_215: 48011-53998 Eucalyptus grandis
Eucgr.L01457 5.0kb downstream 5.0kb downstream 5000 false scaffold_215: 48011-53010 Eucalyptus grandis
Eucgr.L01457 10.0kb upstream 10.0kb upstream 10988 true scaffold_215: 53011-63998 Eucalyptus grandis
Eucgr.L01457 10.0kb upstream 10.0kb upstream 10000 false scaffold_215: 53999-63998 Eucalyptus grandis
Eucgr.L01457 10.0kb downstream 10.0kb downstream 10988 true scaffold_215: 43011-53998 Eucalyptus grandis
Eucgr.L01457 10.0kb downstream 10.0kb downstream 10000 false scaffold_215: 43011-53010 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070661 5270 Rosid View MSA
123750934 5271 Pentapetalae View MSA
122796486 5272 Eudicot View MSA
122049501 5273 Angiosperm View MSA
121311441 5274 Embryophyte View MSA
123348736 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.66171 0.0 9.9615    
cufflinks 12.1169 0.0 29.0862    
cufflinks 5.91767 0.0 15.3146    
cufflinks 10.7069 0.0 25.9915    
cufflinks 3.05285 0.0 8.42459    
cufflinks 0.183516 0.0 0.764333 Low Low

0 Strain