Gene : Eucgr.L01433 E. grandis v2.0
Defline:  (1 of 9) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  4
Name:  ? Eucgr.L01433 Secondary Identifier:  ? PAC:32052457
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01433 0.5kb upstream 0.5kb upstream 4510 true scaffold_204: 26248-30757 Eucalyptus grandis
Eucgr.L01433 0.5kb upstream 0.5kb upstream 500 false scaffold_204: 30258-30757 Eucalyptus grandis
Eucgr.L01433 0.5kb downstream 0.5kb downstream 4510 true scaffold_204: 25748-30257 Eucalyptus grandis
Eucgr.L01433 0.5kb downstream 0.5kb downstream 500 false scaffold_204: 25748-26247 Eucalyptus grandis
Eucgr.L01433 1.0kb upstream 1.0kb upstream 5010 true scaffold_204: 26248-31257 Eucalyptus grandis
Eucgr.L01433 1.0kb upstream 1.0kb upstream 1000 false scaffold_204: 30258-31257 Eucalyptus grandis
Eucgr.L01433 1.0kb downstream 1.0kb downstream 5010 true scaffold_204: 25248-30257 Eucalyptus grandis
Eucgr.L01433 1.0kb downstream 1.0kb downstream 1000 false scaffold_204: 25248-26247 Eucalyptus grandis
Eucgr.L01433 2.0kb upstream 2.0kb upstream 6010 true scaffold_204: 26248-32257 Eucalyptus grandis
Eucgr.L01433 2.0kb upstream 2.0kb upstream 2000 false scaffold_204: 30258-32257 Eucalyptus grandis
Eucgr.L01433 2.0kb downstream 2.0kb downstream 6010 true scaffold_204: 24248-30257 Eucalyptus grandis
Eucgr.L01433 2.0kb downstream 2.0kb downstream 2000 false scaffold_204: 24248-26247 Eucalyptus grandis
Eucgr.L01433 5.0kb upstream 5.0kb upstream 9010 true scaffold_204: 26248-35257 Eucalyptus grandis
Eucgr.L01433 5.0kb upstream 5.0kb upstream 5000 false scaffold_204: 30258-35257 Eucalyptus grandis
Eucgr.L01433 5.0kb downstream 5.0kb downstream 9010 true scaffold_204: 21248-30257 Eucalyptus grandis
Eucgr.L01433 5.0kb downstream 5.0kb downstream 5000 false scaffold_204: 21248-26247 Eucalyptus grandis
Eucgr.L01433 10.0kb upstream 10.0kb upstream 14010 true scaffold_204: 26248-40257 Eucalyptus grandis
Eucgr.L01433 10.0kb upstream 10.0kb upstream 10000 false scaffold_204: 30258-40257 Eucalyptus grandis
Eucgr.L01433 10.0kb downstream 10.0kb downstream 14010 true scaffold_204: 16248-30257 Eucalyptus grandis
Eucgr.L01433 10.0kb downstream 10.0kb downstream 10000 false scaffold_204: 16248-26247 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052352 5270 Rosid View MSA
123750052 5271 Pentapetalae View MSA
122773445 5272 Eudicot View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.404717 0.0 1.27126 Low  
cufflinks 0.0154129 0.0 0.117443 Low Low
cufflinks 0.858836 0.0 2.47527    
cufflinks 0.22984 0.0 0.77856 Low  
cufflinks 0.535198 0.0 1.62444 Low  
cufflinks 0.368547 0.0 1.17037 Low  

0 Strain