Gene : Eucgr.L03139 E. grandis v2.0
Defline:  (1 of 6) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  1
Name:  ? Eucgr.L03139 Secondary Identifier:  ? PAC:32062541
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5466 Eucalyptus grandis pathologic  
Egrandis PWY-6824 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03139 0.5kb upstream 0.5kb upstream 1146 true scaffold_2093: 55-1200 Eucalyptus grandis
Eucgr.L03139 0.5kb upstream 0.5kb upstream 500 false scaffold_2093: 701-1200 Eucalyptus grandis
Eucgr.L03139 0.5kb downstream 0.5kb downstream 700 true scaffold_2093: 1-700 Eucalyptus grandis
Eucgr.L03139 0.5kb downstream 0.5kb downstream 54 false scaffold_2093: 1-54 Eucalyptus grandis
Eucgr.L03139 1.0kb upstream 1.0kb upstream 1646 true scaffold_2093: 55-1700 Eucalyptus grandis
Eucgr.L03139 1.0kb upstream 1.0kb upstream 1000 false scaffold_2093: 701-1700 Eucalyptus grandis
Eucgr.L03139 1.0kb downstream 1.0kb downstream 700 true scaffold_2093: 1-700 Eucalyptus grandis
Eucgr.L03139 1.0kb downstream 1.0kb downstream 54 false scaffold_2093: 1-54 Eucalyptus grandis
Eucgr.L03139 2.0kb upstream 2.0kb upstream 2646 true scaffold_2093: 55-2700 Eucalyptus grandis
Eucgr.L03139 2.0kb upstream 2.0kb upstream 2000 false scaffold_2093: 701-2700 Eucalyptus grandis
Eucgr.L03139 2.0kb downstream 2.0kb downstream 700 true scaffold_2093: 1-700 Eucalyptus grandis
Eucgr.L03139 2.0kb downstream 2.0kb downstream 54 false scaffold_2093: 1-54 Eucalyptus grandis
Eucgr.L03139 5.0kb upstream 5.0kb upstream 5646 true scaffold_2093: 55-5700 Eucalyptus grandis
Eucgr.L03139 5.0kb upstream 5.0kb upstream 5000 false scaffold_2093: 701-5700 Eucalyptus grandis
Eucgr.L03139 5.0kb downstream 5.0kb downstream 700 true scaffold_2093: 1-700 Eucalyptus grandis
Eucgr.L03139 5.0kb downstream 5.0kb downstream 54 false scaffold_2093: 1-54 Eucalyptus grandis
Eucgr.L03139 10.0kb upstream 10.0kb upstream 7376 true scaffold_2093: 55-7430 Eucalyptus grandis
Eucgr.L03139 10.0kb upstream 10.0kb upstream 6730 false scaffold_2093: 701-7430 Eucalyptus grandis
Eucgr.L03139 10.0kb downstream 10.0kb downstream 700 true scaffold_2093: 1-700 Eucalyptus grandis
Eucgr.L03139 10.0kb downstream 10.0kb downstream 54 false scaffold_2093: 1-54 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074163 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain