Gene : Eucgr.L01413 E. grandis v2.0
Defline:  (1 of 3) PTHR11943 - GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE Genomic Order:  1
Name:  ? Eucgr.L01413 Secondary Identifier:  ? PAC:32035891
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01413 0.5kb upstream 0.5kb upstream 2588 true scaffold_201: 3856-6443 Eucalyptus grandis
Eucgr.L01413 0.5kb upstream 0.5kb upstream 500 false scaffold_201: 3856-4355 Eucalyptus grandis
Eucgr.L01413 0.5kb downstream 0.5kb downstream 2588 true scaffold_201: 4356-6943 Eucalyptus grandis
Eucgr.L01413 0.5kb downstream 0.5kb downstream 500 false scaffold_201: 6444-6943 Eucalyptus grandis
Eucgr.L01413 1.0kb upstream 1.0kb upstream 3088 true scaffold_201: 3356-6443 Eucalyptus grandis
Eucgr.L01413 1.0kb upstream 1.0kb upstream 1000 false scaffold_201: 3356-4355 Eucalyptus grandis
Eucgr.L01413 1.0kb downstream 1.0kb downstream 3088 true scaffold_201: 4356-7443 Eucalyptus grandis
Eucgr.L01413 1.0kb downstream 1.0kb downstream 1000 false scaffold_201: 6444-7443 Eucalyptus grandis
Eucgr.L01413 2.0kb upstream 2.0kb upstream 4088 true scaffold_201: 2356-6443 Eucalyptus grandis
Eucgr.L01413 2.0kb upstream 2.0kb upstream 2000 false scaffold_201: 2356-4355 Eucalyptus grandis
Eucgr.L01413 2.0kb downstream 2.0kb downstream 4088 true scaffold_201: 4356-8443 Eucalyptus grandis
Eucgr.L01413 2.0kb downstream 2.0kb downstream 2000 false scaffold_201: 6444-8443 Eucalyptus grandis
Eucgr.L01413 5.0kb upstream 5.0kb upstream 6443 true scaffold_201: 1-6443 Eucalyptus grandis
Eucgr.L01413 5.0kb upstream 5.0kb upstream 4355 false scaffold_201: 1-4355 Eucalyptus grandis
Eucgr.L01413 5.0kb downstream 5.0kb downstream 7088 true scaffold_201: 4356-11443 Eucalyptus grandis
Eucgr.L01413 5.0kb downstream 5.0kb downstream 5000 false scaffold_201: 6444-11443 Eucalyptus grandis
Eucgr.L01413 10.0kb upstream 10.0kb upstream 6443 true scaffold_201: 1-6443 Eucalyptus grandis
Eucgr.L01413 10.0kb upstream 10.0kb upstream 4355 false scaffold_201: 1-4355 Eucalyptus grandis
Eucgr.L01413 10.0kb downstream 10.0kb downstream 12088 true scaffold_201: 4356-16443 Eucalyptus grandis
Eucgr.L01413 10.0kb downstream 10.0kb downstream 10000 false scaffold_201: 6444-16443 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069087 5270 Rosid View MSA
123737596 5271 Pentapetalae View MSA
122790706 5272 Eudicot View MSA
122047985 5273 Angiosperm View MSA
121344081 5274 Embryophyte View MSA
123379971 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6004 0.0 30.1067    
cufflinks 6.19658 0.0 15.914   Low
cufflinks 13.42 0.0 32.0881    
cufflinks 13.6367 0.0 32.5939    
cufflinks 10.0129 0.0 24.5899    
cufflinks 18.653 0.0 42.9623   High

0 Strain