Gene : Eucgr.L01386 E. grandis v2.0
Defline:  (1 of 7) 1.14.11.27 - [Histone H3]-lysine-36 demethylase / JmjC domain-containing histone demethylase 1A Genomic Order:  1
Name:  ? Eucgr.L01386 Secondary Identifier:  ? PAC:32058009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01386 0.5kb upstream 0.5kb upstream 3368 true scaffold_192: 15144-18511 Eucalyptus grandis
Eucgr.L01386 0.5kb upstream 0.5kb upstream 500 false scaffold_192: 18012-18511 Eucalyptus grandis
Eucgr.L01386 0.5kb downstream 0.5kb downstream 3368 true scaffold_192: 14644-18011 Eucalyptus grandis
Eucgr.L01386 0.5kb downstream 0.5kb downstream 500 false scaffold_192: 14644-15143 Eucalyptus grandis
Eucgr.L01386 1.0kb upstream 1.0kb upstream 3868 true scaffold_192: 15144-19011 Eucalyptus grandis
Eucgr.L01386 1.0kb upstream 1.0kb upstream 1000 false scaffold_192: 18012-19011 Eucalyptus grandis
Eucgr.L01386 1.0kb downstream 1.0kb downstream 3868 true scaffold_192: 14144-18011 Eucalyptus grandis
Eucgr.L01386 1.0kb downstream 1.0kb downstream 1000 false scaffold_192: 14144-15143 Eucalyptus grandis
Eucgr.L01386 2.0kb upstream 2.0kb upstream 4868 true scaffold_192: 15144-20011 Eucalyptus grandis
Eucgr.L01386 2.0kb upstream 2.0kb upstream 2000 false scaffold_192: 18012-20011 Eucalyptus grandis
Eucgr.L01386 2.0kb downstream 2.0kb downstream 4868 true scaffold_192: 13144-18011 Eucalyptus grandis
Eucgr.L01386 2.0kb downstream 2.0kb downstream 2000 false scaffold_192: 13144-15143 Eucalyptus grandis
Eucgr.L01386 5.0kb upstream 5.0kb upstream 7868 true scaffold_192: 15144-23011 Eucalyptus grandis
Eucgr.L01386 5.0kb upstream 5.0kb upstream 5000 false scaffold_192: 18012-23011 Eucalyptus grandis
Eucgr.L01386 5.0kb downstream 5.0kb downstream 7868 true scaffold_192: 10144-18011 Eucalyptus grandis
Eucgr.L01386 5.0kb downstream 5.0kb downstream 5000 false scaffold_192: 10144-15143 Eucalyptus grandis
Eucgr.L01386 10.0kb upstream 10.0kb upstream 12868 true scaffold_192: 15144-28011 Eucalyptus grandis
Eucgr.L01386 10.0kb upstream 10.0kb upstream 10000 false scaffold_192: 18012-28011 Eucalyptus grandis
Eucgr.L01386 10.0kb downstream 10.0kb downstream 12868 true scaffold_192: 5144-18011 Eucalyptus grandis
Eucgr.L01386 10.0kb downstream 10.0kb downstream 10000 false scaffold_192: 5144-15143 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070828 5270 Rosid View MSA
123745508 5271 Pentapetalae View MSA
122794724 5272 Eudicot View MSA
122049109 5273 Angiosperm View MSA
121348798 5274 Embryophyte View MSA
123428618 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0371576 0.0 0.22845 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.467957 0.0 1.50488    
cufflinks 0.969082 0.0 2.83061    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain