Gene : Eucgr.L03039 E. grandis v2.0
Defline:  (1 of 100) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  1
Name:  ? Eucgr.L03039 Secondary Identifier:  ? PAC:32027698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03039 0.5kb upstream 0.5kb upstream 1121 true scaffold_1856: 6860-7980 Eucalyptus grandis
Eucgr.L03039 0.5kb upstream 0.5kb upstream 500 false scaffold_1856: 7481-7980 Eucalyptus grandis
Eucgr.L03039 0.5kb downstream 0.5kb downstream 1121 true scaffold_1856: 6360-7480 Eucalyptus grandis
Eucgr.L03039 0.5kb downstream 0.5kb downstream 500 false scaffold_1856: 6360-6859 Eucalyptus grandis
Eucgr.L03039 1.0kb upstream 1.0kb upstream 1621 true scaffold_1856: 6860-8480 Eucalyptus grandis
Eucgr.L03039 1.0kb upstream 1.0kb upstream 1000 false scaffold_1856: 7481-8480 Eucalyptus grandis
Eucgr.L03039 1.0kb downstream 1.0kb downstream 1621 true scaffold_1856: 5860-7480 Eucalyptus grandis
Eucgr.L03039 1.0kb downstream 1.0kb downstream 1000 false scaffold_1856: 5860-6859 Eucalyptus grandis
Eucgr.L03039 2.0kb upstream 2.0kb upstream 1902 true scaffold_1856: 6860-8761 Eucalyptus grandis
Eucgr.L03039 2.0kb upstream 2.0kb upstream 1281 false scaffold_1856: 7481-8761 Eucalyptus grandis
Eucgr.L03039 2.0kb downstream 2.0kb downstream 2621 true scaffold_1856: 4860-7480 Eucalyptus grandis
Eucgr.L03039 2.0kb downstream 2.0kb downstream 2000 false scaffold_1856: 4860-6859 Eucalyptus grandis
Eucgr.L03039 5.0kb upstream 5.0kb upstream 1902 true scaffold_1856: 6860-8761 Eucalyptus grandis
Eucgr.L03039 5.0kb upstream 5.0kb upstream 1281 false scaffold_1856: 7481-8761 Eucalyptus grandis
Eucgr.L03039 5.0kb downstream 5.0kb downstream 5621 true scaffold_1856: 1860-7480 Eucalyptus grandis
Eucgr.L03039 5.0kb downstream 5.0kb downstream 5000 false scaffold_1856: 1860-6859 Eucalyptus grandis
Eucgr.L03039 10.0kb upstream 10.0kb upstream 1902 true scaffold_1856: 6860-8761 Eucalyptus grandis
Eucgr.L03039 10.0kb upstream 10.0kb upstream 1281 false scaffold_1856: 7481-8761 Eucalyptus grandis
Eucgr.L03039 10.0kb downstream 10.0kb downstream 7480 true scaffold_1856: 1-7480 Eucalyptus grandis
Eucgr.L03039 10.0kb downstream 10.0kb downstream 6859 false scaffold_1856: 1-6859 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064319 5270 Rosid View MSA
123741711 5271 Pentapetalae View MSA
122788535 5272 Eudicot View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.78568 0.0 25.9838    
cufflinks 63.8427 0.0 144.047 High High
cufflinks 6.94285 0.0 19.2428    
cufflinks 11.7444 0.0 31.0427    
cufflinks 2.27142 0.0 7.10041    
cufflinks 1.79523 0.0 5.73235   Low

0 Strain