Gene : Eucgr.L02006 E. grandis v2.0
Defline:  (1 of 2) PF08513//PF10607 - LisH (LisH) // CTLH/CRA C-terminal to LisH motif domain (CLTH) Genomic Order:  2
Name:  ? Eucgr.L02006 Secondary Identifier:  ? PAC:32062368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02006 0.5kb upstream 0.5kb upstream 4666 true scaffold_505: 11334-15999 Eucalyptus grandis
Eucgr.L02006 0.5kb upstream 0.5kb upstream 500 false scaffold_505: 15500-15999 Eucalyptus grandis
Eucgr.L02006 0.5kb downstream 0.5kb downstream 4666 true scaffold_505: 10834-15499 Eucalyptus grandis
Eucgr.L02006 0.5kb downstream 0.5kb downstream 500 false scaffold_505: 10834-11333 Eucalyptus grandis
Eucgr.L02006 1.0kb upstream 1.0kb upstream 5166 true scaffold_505: 11334-16499 Eucalyptus grandis
Eucgr.L02006 1.0kb upstream 1.0kb upstream 1000 false scaffold_505: 15500-16499 Eucalyptus grandis
Eucgr.L02006 1.0kb downstream 1.0kb downstream 5166 true scaffold_505: 10334-15499 Eucalyptus grandis
Eucgr.L02006 1.0kb downstream 1.0kb downstream 1000 false scaffold_505: 10334-11333 Eucalyptus grandis
Eucgr.L02006 2.0kb upstream 2.0kb upstream 6166 true scaffold_505: 11334-17499 Eucalyptus grandis
Eucgr.L02006 2.0kb upstream 2.0kb upstream 2000 false scaffold_505: 15500-17499 Eucalyptus grandis
Eucgr.L02006 2.0kb downstream 2.0kb downstream 6166 true scaffold_505: 9334-15499 Eucalyptus grandis
Eucgr.L02006 2.0kb downstream 2.0kb downstream 2000 false scaffold_505: 9334-11333 Eucalyptus grandis
Eucgr.L02006 5.0kb upstream 5.0kb upstream 9166 true scaffold_505: 11334-20499 Eucalyptus grandis
Eucgr.L02006 5.0kb upstream 5.0kb upstream 5000 false scaffold_505: 15500-20499 Eucalyptus grandis
Eucgr.L02006 5.0kb downstream 5.0kb downstream 9166 true scaffold_505: 6334-15499 Eucalyptus grandis
Eucgr.L02006 5.0kb downstream 5.0kb downstream 5000 false scaffold_505: 6334-11333 Eucalyptus grandis
Eucgr.L02006 10.0kb upstream 10.0kb upstream 12943 true scaffold_505: 11334-24276 Eucalyptus grandis
Eucgr.L02006 10.0kb upstream 10.0kb upstream 8777 false scaffold_505: 15500-24276 Eucalyptus grandis
Eucgr.L02006 10.0kb downstream 10.0kb downstream 14166 true scaffold_505: 1334-15499 Eucalyptus grandis
Eucgr.L02006 10.0kb downstream 10.0kb downstream 10000 false scaffold_505: 1334-11333 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050830 5270 Rosid View MSA
123749928 5271 Pentapetalae View MSA
122788874 5272 Eudicot View MSA
122047349 5273 Angiosperm View MSA
121347103 5274 Embryophyte View MSA
123424554 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1331 0.0 36.7077    
cufflinks 17.2066 0.0 45.8887    
cufflinks 13.8023 0.0 34.7071    
cufflinks 24.6355 0.0 63.0091   High
cufflinks 25.8342 0.0 66.0943   High
cufflinks 15.844 0.0 39.9209    

0 Strain