Gene : Eucgr.L01993 E. grandis v2.0
Defline:  (1 of 3) PTHR10774//PTHR10774:SF90 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  3
Name:  ? Eucgr.L01993 Secondary Identifier:  ? PAC:32052326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01993 0.5kb upstream 0.5kb upstream 6479 true scaffold_497: 9070-15548 Eucalyptus grandis
Eucgr.L01993 0.5kb upstream 0.5kb upstream 500 false scaffold_497: 15049-15548 Eucalyptus grandis
Eucgr.L01993 0.5kb downstream 0.5kb downstream 6479 true scaffold_497: 8570-15048 Eucalyptus grandis
Eucgr.L01993 0.5kb downstream 0.5kb downstream 500 false scaffold_497: 8570-9069 Eucalyptus grandis
Eucgr.L01993 1.0kb upstream 1.0kb upstream 6979 true scaffold_497: 9070-16048 Eucalyptus grandis
Eucgr.L01993 1.0kb upstream 1.0kb upstream 1000 false scaffold_497: 15049-16048 Eucalyptus grandis
Eucgr.L01993 1.0kb downstream 1.0kb downstream 6979 true scaffold_497: 8070-15048 Eucalyptus grandis
Eucgr.L01993 1.0kb downstream 1.0kb downstream 1000 false scaffold_497: 8070-9069 Eucalyptus grandis
Eucgr.L01993 2.0kb upstream 2.0kb upstream 7979 true scaffold_497: 9070-17048 Eucalyptus grandis
Eucgr.L01993 2.0kb upstream 2.0kb upstream 2000 false scaffold_497: 15049-17048 Eucalyptus grandis
Eucgr.L01993 2.0kb downstream 2.0kb downstream 7979 true scaffold_497: 7070-15048 Eucalyptus grandis
Eucgr.L01993 2.0kb downstream 2.0kb downstream 2000 false scaffold_497: 7070-9069 Eucalyptus grandis
Eucgr.L01993 5.0kb upstream 5.0kb upstream 10979 true scaffold_497: 9070-20048 Eucalyptus grandis
Eucgr.L01993 5.0kb upstream 5.0kb upstream 5000 false scaffold_497: 15049-20048 Eucalyptus grandis
Eucgr.L01993 5.0kb downstream 5.0kb downstream 10979 true scaffold_497: 4070-15048 Eucalyptus grandis
Eucgr.L01993 5.0kb downstream 5.0kb downstream 5000 false scaffold_497: 4070-9069 Eucalyptus grandis
Eucgr.L01993 10.0kb upstream 10.0kb upstream 15612 true scaffold_497: 9070-24681 Eucalyptus grandis
Eucgr.L01993 10.0kb upstream 10.0kb upstream 9633 false scaffold_497: 15049-24681 Eucalyptus grandis
Eucgr.L01993 10.0kb downstream 10.0kb downstream 15048 true scaffold_497: 1-15048 Eucalyptus grandis
Eucgr.L01993 10.0kb downstream 10.0kb downstream 9069 false scaffold_497: 1-9069 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063672 5270 Rosid View MSA
123738774 5271 Pentapetalae View MSA
122792352 5272 Eudicot View MSA
122044186 5273 Angiosperm View MSA
121350183 5274 Embryophyte View MSA
123381609 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.6414 0.0 8.61325   High
cufflinks 0.640969 0.0 1.9522 Low  
cufflinks 1.99031 0.0 5.0499    
cufflinks 0.871275 0.0 2.48973    
cufflinks 0.281525 0.0 0.97324 Low Low
cufflinks 3.50178 0.0 8.34652   High

0 Strain