Gene : Eucgr.L01971 E. grandis v2.0
Defline:  (1 of 1) PF00027//PF00520//PF11834//PF12796 - Cyclic nucleotide-binding domain (cNMP_binding) // Ion transport protein (Ion_trans) // KHA, dimerisation domain of potassium ion channel (KHA) // Ankyrin repeats (3 copies) (Ank_2) Genomic Order:  3
Name:  ? Eucgr.L01971 Secondary Identifier:  ? PAC:32035836
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01971 0.5kb upstream 0.5kb upstream 12580 true scaffold_478: 10519-23098 Eucalyptus grandis
Eucgr.L01971 0.5kb upstream 0.5kb upstream 500 false scaffold_478: 22599-23098 Eucalyptus grandis
Eucgr.L01971 0.5kb downstream 0.5kb downstream 12580 true scaffold_478: 10019-22598 Eucalyptus grandis
Eucgr.L01971 0.5kb downstream 0.5kb downstream 500 false scaffold_478: 10019-10518 Eucalyptus grandis
Eucgr.L01971 1.0kb upstream 1.0kb upstream 13080 true scaffold_478: 10519-23598 Eucalyptus grandis
Eucgr.L01971 1.0kb upstream 1.0kb upstream 1000 false scaffold_478: 22599-23598 Eucalyptus grandis
Eucgr.L01971 1.0kb downstream 1.0kb downstream 13080 true scaffold_478: 9519-22598 Eucalyptus grandis
Eucgr.L01971 1.0kb downstream 1.0kb downstream 1000 false scaffold_478: 9519-10518 Eucalyptus grandis
Eucgr.L01971 2.0kb upstream 2.0kb upstream 14080 true scaffold_478: 10519-24598 Eucalyptus grandis
Eucgr.L01971 2.0kb upstream 2.0kb upstream 2000 false scaffold_478: 22599-24598 Eucalyptus grandis
Eucgr.L01971 2.0kb downstream 2.0kb downstream 14080 true scaffold_478: 8519-22598 Eucalyptus grandis
Eucgr.L01971 2.0kb downstream 2.0kb downstream 2000 false scaffold_478: 8519-10518 Eucalyptus grandis
Eucgr.L01971 5.0kb upstream 5.0kb upstream 15870 true scaffold_478: 10519-26388 Eucalyptus grandis
Eucgr.L01971 5.0kb upstream 5.0kb upstream 3790 false scaffold_478: 22599-26388 Eucalyptus grandis
Eucgr.L01971 5.0kb downstream 5.0kb downstream 17080 true scaffold_478: 5519-22598 Eucalyptus grandis
Eucgr.L01971 5.0kb downstream 5.0kb downstream 5000 false scaffold_478: 5519-10518 Eucalyptus grandis
Eucgr.L01971 10.0kb upstream 10.0kb upstream 15870 true scaffold_478: 10519-26388 Eucalyptus grandis
Eucgr.L01971 10.0kb upstream 10.0kb upstream 3790 false scaffold_478: 22599-26388 Eucalyptus grandis
Eucgr.L01971 10.0kb downstream 10.0kb downstream 22080 true scaffold_478: 519-22598 Eucalyptus grandis
Eucgr.L01971 10.0kb downstream 10.0kb downstream 10000 false scaffold_478: 519-10518 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071952 5270 Rosid View MSA
123747890 5271 Pentapetalae View MSA
122792503 5272 Eudicot View MSA
122045299 5273 Angiosperm View MSA
121310431 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.63351 0.0 4.42565   Low
cufflinks 12.2025 0.0 27.436    
cufflinks 2.23336 0.0 5.59892   Low
cufflinks 5.43871 0.0 14.2873    
cufflinks 8.74777 0.0 19.9722    
cufflinks 15.1524 0.0 37.8793   High

0 Strain