Gene : Eucgr.L01882 E. grandis v2.0
Defline:  (1 of 2) PTHR11081:SF17 - FLAP ENDONUCLEASE GEN-LIKE 2 Genomic Order:  2
Name:  ? Eucgr.L01882 Secondary Identifier:  ? PAC:32040395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01882 0.5kb upstream 0.5kb upstream 5923 true scaffold_419: 4906-10828 Eucalyptus grandis
Eucgr.L01882 0.5kb upstream 0.5kb upstream 500 false scaffold_419: 4906-5405 Eucalyptus grandis
Eucgr.L01882 0.5kb downstream 0.5kb downstream 5923 true scaffold_419: 5406-11328 Eucalyptus grandis
Eucgr.L01882 0.5kb downstream 0.5kb downstream 500 false scaffold_419: 10829-11328 Eucalyptus grandis
Eucgr.L01882 1.0kb upstream 1.0kb upstream 6423 true scaffold_419: 4406-10828 Eucalyptus grandis
Eucgr.L01882 1.0kb upstream 1.0kb upstream 1000 false scaffold_419: 4406-5405 Eucalyptus grandis
Eucgr.L01882 1.0kb downstream 1.0kb downstream 6423 true scaffold_419: 5406-11828 Eucalyptus grandis
Eucgr.L01882 1.0kb downstream 1.0kb downstream 1000 false scaffold_419: 10829-11828 Eucalyptus grandis
Eucgr.L01882 2.0kb upstream 2.0kb upstream 7423 true scaffold_419: 3406-10828 Eucalyptus grandis
Eucgr.L01882 2.0kb upstream 2.0kb upstream 2000 false scaffold_419: 3406-5405 Eucalyptus grandis
Eucgr.L01882 2.0kb downstream 2.0kb downstream 7423 true scaffold_419: 5406-12828 Eucalyptus grandis
Eucgr.L01882 2.0kb downstream 2.0kb downstream 2000 false scaffold_419: 10829-12828 Eucalyptus grandis
Eucgr.L01882 5.0kb upstream 5.0kb upstream 10423 true scaffold_419: 406-10828 Eucalyptus grandis
Eucgr.L01882 5.0kb upstream 5.0kb upstream 5000 false scaffold_419: 406-5405 Eucalyptus grandis
Eucgr.L01882 5.0kb downstream 5.0kb downstream 10423 true scaffold_419: 5406-15828 Eucalyptus grandis
Eucgr.L01882 5.0kb downstream 5.0kb downstream 5000 false scaffold_419: 10829-15828 Eucalyptus grandis
Eucgr.L01882 10.0kb upstream 10.0kb upstream 10828 true scaffold_419: 1-10828 Eucalyptus grandis
Eucgr.L01882 10.0kb upstream 10.0kb upstream 5405 false scaffold_419: 1-5405 Eucalyptus grandis
Eucgr.L01882 10.0kb downstream 10.0kb downstream 15423 true scaffold_419: 5406-20828 Eucalyptus grandis
Eucgr.L01882 10.0kb downstream 10.0kb downstream 10000 false scaffold_419: 10829-20828 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068955 5270 Rosid View MSA
123737591 5271 Pentapetalae View MSA
122786802 5272 Eudicot View MSA
122050954 5273 Angiosperm View MSA
121312219 5274 Embryophyte View MSA
123349413 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.83076 0.0 4.93719    
cufflinks 0.55623 0.0 1.69582 Low Low
cufflinks 1.53101 0.0 4.19092    
cufflinks 0.656673 0.0 1.95945   Low
cufflinks 1.15617 0.0 3.25889    
cufflinks 1.9942 0.0 5.37077   High

0 Strain