Gene : Eucgr.L01822 E. grandis v2.0
Defline:  (1 of 3) PTHR12391 - ARP2/3 COMPLEX 21 KD SUBUNIT Genomic Order:  2
Name:  ? Eucgr.L01822 Secondary Identifier:  ? PAC:32040308
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01822 0.5kb upstream 0.5kb upstream 1555 true scaffold_382: 10364-11918 Eucalyptus grandis
Eucgr.L01822 0.5kb upstream 0.5kb upstream 500 false scaffold_382: 11419-11918 Eucalyptus grandis
Eucgr.L01822 0.5kb downstream 0.5kb downstream 1555 true scaffold_382: 9864-11418 Eucalyptus grandis
Eucgr.L01822 0.5kb downstream 0.5kb downstream 500 false scaffold_382: 9864-10363 Eucalyptus grandis
Eucgr.L01822 1.0kb upstream 1.0kb upstream 2055 true scaffold_382: 10364-12418 Eucalyptus grandis
Eucgr.L01822 1.0kb upstream 1.0kb upstream 1000 false scaffold_382: 11419-12418 Eucalyptus grandis
Eucgr.L01822 1.0kb downstream 1.0kb downstream 2055 true scaffold_382: 9364-11418 Eucalyptus grandis
Eucgr.L01822 1.0kb downstream 1.0kb downstream 1000 false scaffold_382: 9364-10363 Eucalyptus grandis
Eucgr.L01822 2.0kb upstream 2.0kb upstream 3055 true scaffold_382: 10364-13418 Eucalyptus grandis
Eucgr.L01822 2.0kb upstream 2.0kb upstream 2000 false scaffold_382: 11419-13418 Eucalyptus grandis
Eucgr.L01822 2.0kb downstream 2.0kb downstream 3055 true scaffold_382: 8364-11418 Eucalyptus grandis
Eucgr.L01822 2.0kb downstream 2.0kb downstream 2000 false scaffold_382: 8364-10363 Eucalyptus grandis
Eucgr.L01822 5.0kb upstream 5.0kb upstream 6055 true scaffold_382: 10364-16418 Eucalyptus grandis
Eucgr.L01822 5.0kb upstream 5.0kb upstream 5000 false scaffold_382: 11419-16418 Eucalyptus grandis
Eucgr.L01822 5.0kb downstream 5.0kb downstream 6055 true scaffold_382: 5364-11418 Eucalyptus grandis
Eucgr.L01822 5.0kb downstream 5.0kb downstream 5000 false scaffold_382: 5364-10363 Eucalyptus grandis
Eucgr.L01822 10.0kb upstream 10.0kb upstream 11055 true scaffold_382: 10364-21418 Eucalyptus grandis
Eucgr.L01822 10.0kb upstream 10.0kb upstream 10000 false scaffold_382: 11419-21418 Eucalyptus grandis
Eucgr.L01822 10.0kb downstream 10.0kb downstream 11055 true scaffold_382: 364-11418 Eucalyptus grandis
Eucgr.L01822 10.0kb downstream 10.0kb downstream 10000 false scaffold_382: 364-10363 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026332 5273 Angiosperm View MSA
124064390 5270 Rosid View MSA
123739720 5271 Pentapetalae View MSA
122790933 5272 Eudicot View MSA
121345545 5274 Embryophyte View MSA
123428247 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.194228 0.0 1.62732 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.31521 0.0 5.16064    
cufflinks 0.890034 0.0 3.98081    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain