Gene : Eucgr.L03565 E. grandis v2.0
Defline:  (1 of 1) PTHR12701:SF20 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIG5 Genomic Order:  1
Name:  ? Eucgr.L03565 Secondary Identifier:  ? PAC:32065745
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03565 0.5kb upstream 0.5kb upstream 1518 true scaffold_3666: 2211-3728 Eucalyptus grandis
Eucgr.L03565 0.5kb upstream 0.5kb upstream 500 false scaffold_3666: 2211-2710 Eucalyptus grandis
Eucgr.L03565 0.5kb downstream 0.5kb downstream 1113 true scaffold_3666: 2711-3823 Eucalyptus grandis
Eucgr.L03565 0.5kb downstream 0.5kb downstream 95 false scaffold_3666: 3729-3823 Eucalyptus grandis
Eucgr.L03565 1.0kb upstream 1.0kb upstream 2018 true scaffold_3666: 1711-3728 Eucalyptus grandis
Eucgr.L03565 1.0kb upstream 1.0kb upstream 1000 false scaffold_3666: 1711-2710 Eucalyptus grandis
Eucgr.L03565 1.0kb downstream 1.0kb downstream 1113 true scaffold_3666: 2711-3823 Eucalyptus grandis
Eucgr.L03565 1.0kb downstream 1.0kb downstream 95 false scaffold_3666: 3729-3823 Eucalyptus grandis
Eucgr.L03565 2.0kb upstream 2.0kb upstream 3018 true scaffold_3666: 711-3728 Eucalyptus grandis
Eucgr.L03565 2.0kb upstream 2.0kb upstream 2000 false scaffold_3666: 711-2710 Eucalyptus grandis
Eucgr.L03565 2.0kb downstream 2.0kb downstream 1113 true scaffold_3666: 2711-3823 Eucalyptus grandis
Eucgr.L03565 2.0kb downstream 2.0kb downstream 95 false scaffold_3666: 3729-3823 Eucalyptus grandis
Eucgr.L03565 5.0kb upstream 5.0kb upstream 3728 true scaffold_3666: 1-3728 Eucalyptus grandis
Eucgr.L03565 5.0kb upstream 5.0kb upstream 2710 false scaffold_3666: 1-2710 Eucalyptus grandis
Eucgr.L03565 5.0kb downstream 5.0kb downstream 1113 true scaffold_3666: 2711-3823 Eucalyptus grandis
Eucgr.L03565 5.0kb downstream 5.0kb downstream 95 false scaffold_3666: 3729-3823 Eucalyptus grandis
Eucgr.L03565 10.0kb upstream 10.0kb upstream 3728 true scaffold_3666: 1-3728 Eucalyptus grandis
Eucgr.L03565 10.0kb upstream 10.0kb upstream 2710 false scaffold_3666: 1-2710 Eucalyptus grandis
Eucgr.L03565 10.0kb downstream 10.0kb downstream 1113 true scaffold_3666: 2711-3823 Eucalyptus grandis
Eucgr.L03565 10.0kb downstream 10.0kb downstream 95 false scaffold_3666: 3729-3823 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061614 5270 Rosid View MSA
123738808 5271 Pentapetalae View MSA
122789098 5272 Eudicot View MSA
122042109 5273 Angiosperm View MSA
121344883 5274 Embryophyte View MSA
123380122 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.8189 0.0 76.6282 High Low
cufflinks 96.0951 0.0 212.638 High High
cufflinks 40.7869 0.0 91.7254 High  
cufflinks 87.3082 0.0 193.084 High  
cufflinks 66.1955 0.0 146.595 High  
cufflinks 45.0736 0.0 100.716 High  

0 Strain