Gene : Eucgr.L03582 E. grandis v2.0
Defline:  (1 of 3) PTHR26402//PTHR26402:SF574 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM Genomic Order:  1
Name:  ? Eucgr.L03582 Secondary Identifier:  ? PAC:32069919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03582 0.5kb upstream 0.5kb upstream 1281 true scaffold_3770: 2046-3326 Eucalyptus grandis
Eucgr.L03582 0.5kb upstream 0.5kb upstream 500 false scaffold_3770: 2046-2545 Eucalyptus grandis
Eucgr.L03582 0.5kb downstream 0.5kb downstream 1172 true scaffold_3770: 2546-3717 Eucalyptus grandis
Eucgr.L03582 0.5kb downstream 0.5kb downstream 391 false scaffold_3770: 3327-3717 Eucalyptus grandis
Eucgr.L03582 1.0kb upstream 1.0kb upstream 1781 true scaffold_3770: 1546-3326 Eucalyptus grandis
Eucgr.L03582 1.0kb upstream 1.0kb upstream 1000 false scaffold_3770: 1546-2545 Eucalyptus grandis
Eucgr.L03582 1.0kb downstream 1.0kb downstream 1172 true scaffold_3770: 2546-3717 Eucalyptus grandis
Eucgr.L03582 1.0kb downstream 1.0kb downstream 391 false scaffold_3770: 3327-3717 Eucalyptus grandis
Eucgr.L03582 2.0kb upstream 2.0kb upstream 2781 true scaffold_3770: 546-3326 Eucalyptus grandis
Eucgr.L03582 2.0kb upstream 2.0kb upstream 2000 false scaffold_3770: 546-2545 Eucalyptus grandis
Eucgr.L03582 2.0kb downstream 2.0kb downstream 1172 true scaffold_3770: 2546-3717 Eucalyptus grandis
Eucgr.L03582 2.0kb downstream 2.0kb downstream 391 false scaffold_3770: 3327-3717 Eucalyptus grandis
Eucgr.L03582 5.0kb upstream 5.0kb upstream 3326 true scaffold_3770: 1-3326 Eucalyptus grandis
Eucgr.L03582 5.0kb upstream 5.0kb upstream 2545 false scaffold_3770: 1-2545 Eucalyptus grandis
Eucgr.L03582 5.0kb downstream 5.0kb downstream 1172 true scaffold_3770: 2546-3717 Eucalyptus grandis
Eucgr.L03582 5.0kb downstream 5.0kb downstream 391 false scaffold_3770: 3327-3717 Eucalyptus grandis
Eucgr.L03582 10.0kb upstream 10.0kb upstream 3326 true scaffold_3770: 1-3326 Eucalyptus grandis
Eucgr.L03582 10.0kb upstream 10.0kb upstream 2545 false scaffold_3770: 1-2545 Eucalyptus grandis
Eucgr.L03582 10.0kb downstream 10.0kb downstream 1172 true scaffold_3770: 2546-3717 Eucalyptus grandis
Eucgr.L03582 10.0kb downstream 10.0kb downstream 391 false scaffold_3770: 3327-3717 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124049099 5270 Rosid Singleton cluster - no MSA
123748366 5271 Pentapetalae View MSA
122792334 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.86464 0.0 20.0127    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.03846 0.0 6.96268    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain