Gene : Eucgr.L01763 E. grandis v2.0
Defline:  (1 of 10) 5.3.1.6 - Ribose-5-phosphate isomerase / Ribose phosphate isomerase Genomic Order:  2
Name:  ? Eucgr.L01763 Secondary Identifier:  ? PAC:32035855
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CALVIN-PWY Eucalyptus grandis pathologic  
Egrandis NONOXIPENT-PWY Eucalyptus grandis pathologic  
Egrandis PENTOSE-P-PWY Eucalyptus grandis pathologic  
Egrandis PHOTOALL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01763 0.5kb upstream 0.5kb upstream 2436 true scaffold_345: 42943-45378 Eucalyptus grandis
Eucgr.L01763 0.5kb upstream 0.5kb upstream 500 false scaffold_345: 42943-43442 Eucalyptus grandis
Eucgr.L01763 0.5kb downstream 0.5kb downstream 2436 true scaffold_345: 43443-45878 Eucalyptus grandis
Eucgr.L01763 0.5kb downstream 0.5kb downstream 500 false scaffold_345: 45379-45878 Eucalyptus grandis
Eucgr.L01763 1.0kb upstream 1.0kb upstream 2936 true scaffold_345: 42443-45378 Eucalyptus grandis
Eucgr.L01763 1.0kb upstream 1.0kb upstream 1000 false scaffold_345: 42443-43442 Eucalyptus grandis
Eucgr.L01763 1.0kb downstream 1.0kb downstream 2936 true scaffold_345: 43443-46378 Eucalyptus grandis
Eucgr.L01763 1.0kb downstream 1.0kb downstream 1000 false scaffold_345: 45379-46378 Eucalyptus grandis
Eucgr.L01763 2.0kb upstream 2.0kb upstream 3936 true scaffold_345: 41443-45378 Eucalyptus grandis
Eucgr.L01763 2.0kb upstream 2.0kb upstream 2000 false scaffold_345: 41443-43442 Eucalyptus grandis
Eucgr.L01763 2.0kb downstream 2.0kb downstream 3936 true scaffold_345: 43443-47378 Eucalyptus grandis
Eucgr.L01763 2.0kb downstream 2.0kb downstream 2000 false scaffold_345: 45379-47378 Eucalyptus grandis
Eucgr.L01763 5.0kb upstream 5.0kb upstream 6936 true scaffold_345: 38443-45378 Eucalyptus grandis
Eucgr.L01763 5.0kb upstream 5.0kb upstream 5000 false scaffold_345: 38443-43442 Eucalyptus grandis
Eucgr.L01763 5.0kb downstream 5.0kb downstream 6936 true scaffold_345: 43443-50378 Eucalyptus grandis
Eucgr.L01763 5.0kb downstream 5.0kb downstream 5000 false scaffold_345: 45379-50378 Eucalyptus grandis
Eucgr.L01763 10.0kb upstream 10.0kb upstream 11936 true scaffold_345: 33443-45378 Eucalyptus grandis
Eucgr.L01763 10.0kb upstream 10.0kb upstream 10000 false scaffold_345: 33443-43442 Eucalyptus grandis
Eucgr.L01763 10.0kb downstream 10.0kb downstream 11936 true scaffold_345: 43443-55378 Eucalyptus grandis
Eucgr.L01763 10.0kb downstream 10.0kb downstream 10000 false scaffold_345: 45379-55378 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062390 5270 Rosid View MSA
123736544 5271 Pentapetalae View MSA
122789174 5272 Eudicot View MSA
122042906 5273 Angiosperm View MSA
121349668 5274 Embryophyte View MSA
123381392 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.18935 0.0 15.7571    
cufflinks 14.4851 0.0 34.3327    
cufflinks 6.61845 0.0 16.9512    
cufflinks 19.9491 0.0 46.1922   High
cufflinks 17.035 0.0 39.7019    
cufflinks 3.13088 0.0 8.41445   Low

0 Strain