Gene : Eucgr.L03369 E. grandis v2.0
Defline:  (1 of 1) PTHR13844//PTHR13844:SF10 - BRG-1 ASSOCIATED FACTOR 60 BAF60 Genomic Order:  1
Name:  ? Eucgr.L03369 Secondary Identifier:  ? PAC:32052492
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03369 0.5kb upstream 0.5kb upstream 2393 true scaffold_2858: 2471-4863 Eucalyptus grandis
Eucgr.L03369 0.5kb upstream 0.5kb upstream 117 false scaffold_2858: 4747-4863 Eucalyptus grandis
Eucgr.L03369 0.5kb downstream 0.5kb downstream 2776 true scaffold_2858: 1971-4746 Eucalyptus grandis
Eucgr.L03369 0.5kb downstream 0.5kb downstream 500 false scaffold_2858: 1971-2470 Eucalyptus grandis
Eucgr.L03369 1.0kb upstream 1.0kb upstream 2393 true scaffold_2858: 2471-4863 Eucalyptus grandis
Eucgr.L03369 1.0kb upstream 1.0kb upstream 117 false scaffold_2858: 4747-4863 Eucalyptus grandis
Eucgr.L03369 1.0kb downstream 1.0kb downstream 3276 true scaffold_2858: 1471-4746 Eucalyptus grandis
Eucgr.L03369 1.0kb downstream 1.0kb downstream 1000 false scaffold_2858: 1471-2470 Eucalyptus grandis
Eucgr.L03369 2.0kb upstream 2.0kb upstream 2393 true scaffold_2858: 2471-4863 Eucalyptus grandis
Eucgr.L03369 2.0kb upstream 2.0kb upstream 117 false scaffold_2858: 4747-4863 Eucalyptus grandis
Eucgr.L03369 2.0kb downstream 2.0kb downstream 4276 true scaffold_2858: 471-4746 Eucalyptus grandis
Eucgr.L03369 2.0kb downstream 2.0kb downstream 2000 false scaffold_2858: 471-2470 Eucalyptus grandis
Eucgr.L03369 5.0kb upstream 5.0kb upstream 2393 true scaffold_2858: 2471-4863 Eucalyptus grandis
Eucgr.L03369 5.0kb upstream 5.0kb upstream 117 false scaffold_2858: 4747-4863 Eucalyptus grandis
Eucgr.L03369 5.0kb downstream 5.0kb downstream 4746 true scaffold_2858: 1-4746 Eucalyptus grandis
Eucgr.L03369 5.0kb downstream 5.0kb downstream 2470 false scaffold_2858: 1-2470 Eucalyptus grandis
Eucgr.L03369 10.0kb upstream 10.0kb upstream 2393 true scaffold_2858: 2471-4863 Eucalyptus grandis
Eucgr.L03369 10.0kb upstream 10.0kb upstream 117 false scaffold_2858: 4747-4863 Eucalyptus grandis
Eucgr.L03369 10.0kb downstream 10.0kb downstream 4746 true scaffold_2858: 1-4746 Eucalyptus grandis
Eucgr.L03369 10.0kb downstream 10.0kb downstream 2470 false scaffold_2858: 1-2470 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069703 5270 Rosid View MSA
123745418 5271 Pentapetalae View MSA
122789577 5272 Eudicot View MSA
122051489 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121346122 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9991 0.0 51.5949    
cufflinks 16.6258 0.0 39.8423    
cufflinks 20.7376 0.0 49.0048    
cufflinks 4.67104 0.0 12.7467   Low
cufflinks 7.89397 0.0 20.4023    
cufflinks 18.1633 0.0 43.4934    

0 Strain