Gene : Eucgr.L02525 E. grandis v2.0
Defline:  (1 of 4) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  1
Name:  ? Eucgr.L02525 Secondary Identifier:  ? PAC:32035871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02525 0.5kb upstream 0.5kb upstream 1619 true scaffold_991: 246-1864 Eucalyptus grandis
Eucgr.L02525 0.5kb upstream 0.5kb upstream 500 false scaffold_991: 1365-1864 Eucalyptus grandis
Eucgr.L02525 0.5kb downstream 0.5kb downstream 1364 true scaffold_991: 1-1364 Eucalyptus grandis
Eucgr.L02525 0.5kb downstream 0.5kb downstream 245 false scaffold_991: 1-245 Eucalyptus grandis
Eucgr.L02525 1.0kb upstream 1.0kb upstream 2119 true scaffold_991: 246-2364 Eucalyptus grandis
Eucgr.L02525 1.0kb upstream 1.0kb upstream 1000 false scaffold_991: 1365-2364 Eucalyptus grandis
Eucgr.L02525 1.0kb downstream 1.0kb downstream 1364 true scaffold_991: 1-1364 Eucalyptus grandis
Eucgr.L02525 1.0kb downstream 1.0kb downstream 245 false scaffold_991: 1-245 Eucalyptus grandis
Eucgr.L02525 2.0kb upstream 2.0kb upstream 3119 true scaffold_991: 246-3364 Eucalyptus grandis
Eucgr.L02525 2.0kb upstream 2.0kb upstream 2000 false scaffold_991: 1365-3364 Eucalyptus grandis
Eucgr.L02525 2.0kb downstream 2.0kb downstream 1364 true scaffold_991: 1-1364 Eucalyptus grandis
Eucgr.L02525 2.0kb downstream 2.0kb downstream 245 false scaffold_991: 1-245 Eucalyptus grandis
Eucgr.L02525 5.0kb upstream 5.0kb upstream 6119 true scaffold_991: 246-6364 Eucalyptus grandis
Eucgr.L02525 5.0kb upstream 5.0kb upstream 5000 false scaffold_991: 1365-6364 Eucalyptus grandis
Eucgr.L02525 5.0kb downstream 5.0kb downstream 1364 true scaffold_991: 1-1364 Eucalyptus grandis
Eucgr.L02525 5.0kb downstream 5.0kb downstream 245 false scaffold_991: 1-245 Eucalyptus grandis
Eucgr.L02525 10.0kb upstream 10.0kb upstream 11119 true scaffold_991: 246-11364 Eucalyptus grandis
Eucgr.L02525 10.0kb upstream 10.0kb upstream 10000 false scaffold_991: 1365-11364 Eucalyptus grandis
Eucgr.L02525 10.0kb downstream 10.0kb downstream 1364 true scaffold_991: 1-1364 Eucalyptus grandis
Eucgr.L02525 10.0kb downstream 10.0kb downstream 245 false scaffold_991: 1-245 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052043 5270 Rosid View MSA
123752604 5271 Pentapetalae View MSA
122774668 5272 Eudicot View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.2401 0.0 89.1416 High  
cufflinks 20.9762 0.0 47.8499    
cufflinks 26.7112 0.0 59.971 High  
cufflinks 18.8534 0.0 43.1994    
cufflinks 58.1241 0.0 128.556 High High
cufflinks 20.8656 0.0 47.2316    

0 Strain