Gene : Eucgr.L02449 E. grandis v2.0
Defline:  (1 of 14) PTHR10366:SF425 - BRASSINOSTEROID METABOLIC PATHWAY PROTEIN BEN1 Genomic Order:  1
Name:  ? Eucgr.L02449 Secondary Identifier:  ? PAC:32040684
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02449 0.5kb upstream 0.5kb upstream 2616 true scaffold_918: 7918-10533 Eucalyptus grandis
Eucgr.L02449 0.5kb upstream 0.5kb upstream 500 false scaffold_918: 7918-8417 Eucalyptus grandis
Eucgr.L02449 0.5kb downstream 0.5kb downstream 2616 true scaffold_918: 8418-11033 Eucalyptus grandis
Eucgr.L02449 0.5kb downstream 0.5kb downstream 500 false scaffold_918: 10534-11033 Eucalyptus grandis
Eucgr.L02449 1.0kb upstream 1.0kb upstream 3116 true scaffold_918: 7418-10533 Eucalyptus grandis
Eucgr.L02449 1.0kb upstream 1.0kb upstream 1000 false scaffold_918: 7418-8417 Eucalyptus grandis
Eucgr.L02449 1.0kb downstream 1.0kb downstream 3116 true scaffold_918: 8418-11533 Eucalyptus grandis
Eucgr.L02449 1.0kb downstream 1.0kb downstream 1000 false scaffold_918: 10534-11533 Eucalyptus grandis
Eucgr.L02449 2.0kb upstream 2.0kb upstream 4116 true scaffold_918: 6418-10533 Eucalyptus grandis
Eucgr.L02449 2.0kb upstream 2.0kb upstream 2000 false scaffold_918: 6418-8417 Eucalyptus grandis
Eucgr.L02449 2.0kb downstream 2.0kb downstream 4116 true scaffold_918: 8418-12533 Eucalyptus grandis
Eucgr.L02449 2.0kb downstream 2.0kb downstream 2000 false scaffold_918: 10534-12533 Eucalyptus grandis
Eucgr.L02449 5.0kb upstream 5.0kb upstream 7116 true scaffold_918: 3418-10533 Eucalyptus grandis
Eucgr.L02449 5.0kb upstream 5.0kb upstream 5000 false scaffold_918: 3418-8417 Eucalyptus grandis
Eucgr.L02449 5.0kb downstream 5.0kb downstream 6611 true scaffold_918: 8418-15028 Eucalyptus grandis
Eucgr.L02449 5.0kb downstream 5.0kb downstream 4495 false scaffold_918: 10534-15028 Eucalyptus grandis
Eucgr.L02449 10.0kb upstream 10.0kb upstream 10533 true scaffold_918: 1-10533 Eucalyptus grandis
Eucgr.L02449 10.0kb upstream 10.0kb upstream 8417 false scaffold_918: 1-8417 Eucalyptus grandis
Eucgr.L02449 10.0kb downstream 10.0kb downstream 6611 true scaffold_918: 8418-15028 Eucalyptus grandis
Eucgr.L02449 10.0kb downstream 10.0kb downstream 4495 false scaffold_918: 10534-15028 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031301 5273 Angiosperm View MSA
124066855 5270 Rosid View MSA
123745083 5271 Pentapetalae View MSA
122790638 5272 Eudicot View MSA
121300366 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.28201 0.0 8.94775   Low
cufflinks 22.8712 0.0 52.0224    
cufflinks 4.2207 0.0 11.2881    
cufflinks 28.8193 0.0 64.8514   High
cufflinks 15.9873 0.0 37.3505    
cufflinks 4.3359 0.0 11.4838    

0 Strain