Gene : Eucgr.L02439 E. grandis v2.0
Defline:  (1 of 21) PTHR32278:SF6 - F-BOX PROTEIN PP2-B1-RELATED Genomic Order:  1
Name:  ? Eucgr.L02439 Secondary Identifier:  ? PAC:32040328
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02439 0.5kb upstream 0.5kb upstream 3112 true scaffold_909: 12090-15201 Eucalyptus grandis
Eucgr.L02439 0.5kb upstream 0.5kb upstream 36 false scaffold_909: 15166-15201 Eucalyptus grandis
Eucgr.L02439 0.5kb downstream 0.5kb downstream 3576 true scaffold_909: 11590-15165 Eucalyptus grandis
Eucgr.L02439 0.5kb downstream 0.5kb downstream 500 false scaffold_909: 11590-12089 Eucalyptus grandis
Eucgr.L02439 1.0kb upstream 1.0kb upstream 3112 true scaffold_909: 12090-15201 Eucalyptus grandis
Eucgr.L02439 1.0kb upstream 1.0kb upstream 36 false scaffold_909: 15166-15201 Eucalyptus grandis
Eucgr.L02439 1.0kb downstream 1.0kb downstream 4076 true scaffold_909: 11090-15165 Eucalyptus grandis
Eucgr.L02439 1.0kb downstream 1.0kb downstream 1000 false scaffold_909: 11090-12089 Eucalyptus grandis
Eucgr.L02439 2.0kb upstream 2.0kb upstream 3112 true scaffold_909: 12090-15201 Eucalyptus grandis
Eucgr.L02439 2.0kb upstream 2.0kb upstream 36 false scaffold_909: 15166-15201 Eucalyptus grandis
Eucgr.L02439 2.0kb downstream 2.0kb downstream 5076 true scaffold_909: 10090-15165 Eucalyptus grandis
Eucgr.L02439 2.0kb downstream 2.0kb downstream 2000 false scaffold_909: 10090-12089 Eucalyptus grandis
Eucgr.L02439 5.0kb upstream 5.0kb upstream 3112 true scaffold_909: 12090-15201 Eucalyptus grandis
Eucgr.L02439 5.0kb upstream 5.0kb upstream 36 false scaffold_909: 15166-15201 Eucalyptus grandis
Eucgr.L02439 5.0kb downstream 5.0kb downstream 8076 true scaffold_909: 7090-15165 Eucalyptus grandis
Eucgr.L02439 5.0kb downstream 5.0kb downstream 5000 false scaffold_909: 7090-12089 Eucalyptus grandis
Eucgr.L02439 10.0kb upstream 10.0kb upstream 3112 true scaffold_909: 12090-15201 Eucalyptus grandis
Eucgr.L02439 10.0kb upstream 10.0kb upstream 36 false scaffold_909: 15166-15201 Eucalyptus grandis
Eucgr.L02439 10.0kb downstream 10.0kb downstream 13076 true scaffold_909: 2090-15165 Eucalyptus grandis
Eucgr.L02439 10.0kb downstream 10.0kb downstream 10000 false scaffold_909: 2090-12089 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073943 5270 Rosid View MSA
123752990 5271 Pentapetalae View MSA
122797907 5272 Eudicot View MSA
122050927 5273 Angiosperm View MSA
121349666 5274 Embryophyte View MSA
123381391 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.96711 0.0 5.73374    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.34217 0.0 6.72031   High
cufflinks 0.652506 0.0 2.18649    
cufflinks 0.636085 0.0 2.14035 Low Low
cufflinks 1.20301 0.0 3.69954    

0 Strain