Gene : Eucgr.L02396 E. grandis v2.0
Defline:  (1 of 5) KOG2521 - Uncharacterized conserved protein Genomic Order:  1
Name:  ? Eucgr.L02396 Secondary Identifier:  ? PAC:32027926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02396 0.5kb upstream 0.5kb upstream 6936 true scaffold_857: 5642-12577 Eucalyptus grandis
Eucgr.L02396 0.5kb upstream 0.5kb upstream 500 false scaffold_857: 12078-12577 Eucalyptus grandis
Eucgr.L02396 0.5kb downstream 0.5kb downstream 6936 true scaffold_857: 5142-12077 Eucalyptus grandis
Eucgr.L02396 0.5kb downstream 0.5kb downstream 500 false scaffold_857: 5142-5641 Eucalyptus grandis
Eucgr.L02396 1.0kb upstream 1.0kb upstream 7436 true scaffold_857: 5642-13077 Eucalyptus grandis
Eucgr.L02396 1.0kb upstream 1.0kb upstream 1000 false scaffold_857: 12078-13077 Eucalyptus grandis
Eucgr.L02396 1.0kb downstream 1.0kb downstream 7436 true scaffold_857: 4642-12077 Eucalyptus grandis
Eucgr.L02396 1.0kb downstream 1.0kb downstream 1000 false scaffold_857: 4642-5641 Eucalyptus grandis
Eucgr.L02396 2.0kb upstream 2.0kb upstream 8436 true scaffold_857: 5642-14077 Eucalyptus grandis
Eucgr.L02396 2.0kb upstream 2.0kb upstream 2000 false scaffold_857: 12078-14077 Eucalyptus grandis
Eucgr.L02396 2.0kb downstream 2.0kb downstream 8436 true scaffold_857: 3642-12077 Eucalyptus grandis
Eucgr.L02396 2.0kb downstream 2.0kb downstream 2000 false scaffold_857: 3642-5641 Eucalyptus grandis
Eucgr.L02396 5.0kb upstream 5.0kb upstream 10211 true scaffold_857: 5642-15852 Eucalyptus grandis
Eucgr.L02396 5.0kb upstream 5.0kb upstream 3775 false scaffold_857: 12078-15852 Eucalyptus grandis
Eucgr.L02396 5.0kb downstream 5.0kb downstream 11436 true scaffold_857: 642-12077 Eucalyptus grandis
Eucgr.L02396 5.0kb downstream 5.0kb downstream 5000 false scaffold_857: 642-5641 Eucalyptus grandis
Eucgr.L02396 10.0kb upstream 10.0kb upstream 10211 true scaffold_857: 5642-15852 Eucalyptus grandis
Eucgr.L02396 10.0kb upstream 10.0kb upstream 3775 false scaffold_857: 12078-15852 Eucalyptus grandis
Eucgr.L02396 10.0kb downstream 10.0kb downstream 12077 true scaffold_857: 1-12077 Eucalyptus grandis
Eucgr.L02396 10.0kb downstream 10.0kb downstream 5641 false scaffold_857: 1-5641 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067684 5270 Rosid View MSA
123747680 5271 Pentapetalae View MSA
122786180 5272 Eudicot View MSA
122043502 5273 Angiosperm View MSA
121347212 5274 Embryophyte View MSA
123380510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.3786 0.0 8.91578    
cufflinks 7.75245 0.0 18.7504   High
cufflinks 3.64177 0.0 9.52979    
cufflinks 2.12246 0.0 5.83388    
cufflinks 1.88861 0.0 5.26611   Low
cufflinks 7.73144 0.0 18.8636   High

0 Strain