Gene : Eucgr.L02345 E. grandis v2.0
Defline:  (1 of 2) PF09762 - Coiled-coil domain-containing protein (DUF2037) (KOG2701) Genomic Order:  1
Name:  ? Eucgr.L02345 Secondary Identifier:  ? PAC:32027747
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02345 0.5kb upstream 0.5kb upstream 8585 true scaffold_809: 7790-16374 Eucalyptus grandis
Eucgr.L02345 0.5kb upstream 0.5kb upstream 500 false scaffold_809: 7790-8289 Eucalyptus grandis
Eucgr.L02345 0.5kb downstream 0.5kb downstream 8380 true scaffold_809: 8290-16669 Eucalyptus grandis
Eucgr.L02345 0.5kb downstream 0.5kb downstream 295 false scaffold_809: 16375-16669 Eucalyptus grandis
Eucgr.L02345 1.0kb upstream 1.0kb upstream 9085 true scaffold_809: 7290-16374 Eucalyptus grandis
Eucgr.L02345 1.0kb upstream 1.0kb upstream 1000 false scaffold_809: 7290-8289 Eucalyptus grandis
Eucgr.L02345 1.0kb downstream 1.0kb downstream 8380 true scaffold_809: 8290-16669 Eucalyptus grandis
Eucgr.L02345 1.0kb downstream 1.0kb downstream 295 false scaffold_809: 16375-16669 Eucalyptus grandis
Eucgr.L02345 2.0kb upstream 2.0kb upstream 10085 true scaffold_809: 6290-16374 Eucalyptus grandis
Eucgr.L02345 2.0kb upstream 2.0kb upstream 2000 false scaffold_809: 6290-8289 Eucalyptus grandis
Eucgr.L02345 2.0kb downstream 2.0kb downstream 8380 true scaffold_809: 8290-16669 Eucalyptus grandis
Eucgr.L02345 2.0kb downstream 2.0kb downstream 295 false scaffold_809: 16375-16669 Eucalyptus grandis
Eucgr.L02345 5.0kb upstream 5.0kb upstream 13085 true scaffold_809: 3290-16374 Eucalyptus grandis
Eucgr.L02345 5.0kb upstream 5.0kb upstream 5000 false scaffold_809: 3290-8289 Eucalyptus grandis
Eucgr.L02345 5.0kb downstream 5.0kb downstream 8380 true scaffold_809: 8290-16669 Eucalyptus grandis
Eucgr.L02345 5.0kb downstream 5.0kb downstream 295 false scaffold_809: 16375-16669 Eucalyptus grandis
Eucgr.L02345 10.0kb upstream 10.0kb upstream 16374 true scaffold_809: 1-16374 Eucalyptus grandis
Eucgr.L02345 10.0kb upstream 10.0kb upstream 8289 false scaffold_809: 1-8289 Eucalyptus grandis
Eucgr.L02345 10.0kb downstream 10.0kb downstream 8380 true scaffold_809: 8290-16669 Eucalyptus grandis
Eucgr.L02345 10.0kb downstream 10.0kb downstream 295 false scaffold_809: 16375-16669 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067855 5270 Rosid View MSA
123739258 5271 Pentapetalae View MSA
122792761 5272 Eudicot View MSA
122049563 5273 Angiosperm View MSA
121349133 5274 Embryophyte View MSA
123381184 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79586 0.0 13.8895    
cufflinks 7.26412 0.0 17.0494    
cufflinks 3.046 0.0 9.79487   Low
cufflinks 9.37429 0.0 25.2269   High
cufflinks 4.77706 0.0 11.8089    
cufflinks 2.8869 0.0 7.98451   Low

0 Strain