Gene : Eucgr.L00886 E. grandis v2.0
Defline:  (1 of 7) PF07676 - WD40-like Beta Propeller Repeat (PD40) Genomic Order:  3
Name:  ? Eucgr.L00886 Secondary Identifier:  ? PAC:32040506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00886 0.5kb upstream 0.5kb upstream 2476 true scaffold_67: 81417-83892 Eucalyptus grandis
Eucgr.L00886 0.5kb upstream 0.5kb upstream 500 false scaffold_67: 83393-83892 Eucalyptus grandis
Eucgr.L00886 0.5kb downstream 0.5kb downstream 2476 true scaffold_67: 80917-83392 Eucalyptus grandis
Eucgr.L00886 0.5kb downstream 0.5kb downstream 500 false scaffold_67: 80917-81416 Eucalyptus grandis
Eucgr.L00886 1.0kb upstream 1.0kb upstream 2976 true scaffold_67: 81417-84392 Eucalyptus grandis
Eucgr.L00886 1.0kb upstream 1.0kb upstream 1000 false scaffold_67: 83393-84392 Eucalyptus grandis
Eucgr.L00886 1.0kb downstream 1.0kb downstream 2976 true scaffold_67: 80417-83392 Eucalyptus grandis
Eucgr.L00886 1.0kb downstream 1.0kb downstream 1000 false scaffold_67: 80417-81416 Eucalyptus grandis
Eucgr.L00886 2.0kb upstream 2.0kb upstream 3976 true scaffold_67: 81417-85392 Eucalyptus grandis
Eucgr.L00886 2.0kb upstream 2.0kb upstream 2000 false scaffold_67: 83393-85392 Eucalyptus grandis
Eucgr.L00886 2.0kb downstream 2.0kb downstream 3976 true scaffold_67: 79417-83392 Eucalyptus grandis
Eucgr.L00886 2.0kb downstream 2.0kb downstream 2000 false scaffold_67: 79417-81416 Eucalyptus grandis
Eucgr.L00886 5.0kb upstream 5.0kb upstream 6976 true scaffold_67: 81417-88392 Eucalyptus grandis
Eucgr.L00886 5.0kb upstream 5.0kb upstream 5000 false scaffold_67: 83393-88392 Eucalyptus grandis
Eucgr.L00886 5.0kb downstream 5.0kb downstream 6976 true scaffold_67: 76417-83392 Eucalyptus grandis
Eucgr.L00886 5.0kb downstream 5.0kb downstream 5000 false scaffold_67: 76417-81416 Eucalyptus grandis
Eucgr.L00886 10.0kb upstream 10.0kb upstream 11976 true scaffold_67: 81417-93392 Eucalyptus grandis
Eucgr.L00886 10.0kb upstream 10.0kb upstream 10000 false scaffold_67: 83393-93392 Eucalyptus grandis
Eucgr.L00886 10.0kb downstream 10.0kb downstream 11976 true scaffold_67: 71417-83392 Eucalyptus grandis
Eucgr.L00886 10.0kb downstream 10.0kb downstream 10000 false scaffold_67: 71417-81416 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062659 5270 Rosid View MSA
123740244 5271 Pentapetalae View MSA
122792271 5272 Eudicot View MSA
122050472 5273 Angiosperm View MSA
121347738 5274 Embryophyte View MSA
123424154 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.375805 0.0 1.21296 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.157671 0.0 0.580017 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.348444 0.0 1.12062 Low  

0 Strain