Gene : Eucgr.L02201 E. grandis v2.0
Defline:  (1 of 26) PTHR31989:SF21 - NAC TRANSCRIPTION FACTOR-LIKE 9 Genomic Order:  1
Name:  ? Eucgr.L02201 Secondary Identifier:  ? PAC:32062328
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02201 0.5kb upstream 0.5kb upstream 2282 true scaffold_667: 46-2327 Eucalyptus grandis
Eucgr.L02201 0.5kb upstream 0.5kb upstream 500 false scaffold_667: 1828-2327 Eucalyptus grandis
Eucgr.L02201 0.5kb downstream 0.5kb downstream 1827 true scaffold_667: 1-1827 Eucalyptus grandis
Eucgr.L02201 0.5kb downstream 0.5kb downstream 45 false scaffold_667: 1-45 Eucalyptus grandis
Eucgr.L02201 1.0kb upstream 1.0kb upstream 2782 true scaffold_667: 46-2827 Eucalyptus grandis
Eucgr.L02201 1.0kb upstream 1.0kb upstream 1000 false scaffold_667: 1828-2827 Eucalyptus grandis
Eucgr.L02201 1.0kb downstream 1.0kb downstream 1827 true scaffold_667: 1-1827 Eucalyptus grandis
Eucgr.L02201 1.0kb downstream 1.0kb downstream 45 false scaffold_667: 1-45 Eucalyptus grandis
Eucgr.L02201 2.0kb upstream 2.0kb upstream 3782 true scaffold_667: 46-3827 Eucalyptus grandis
Eucgr.L02201 2.0kb upstream 2.0kb upstream 2000 false scaffold_667: 1828-3827 Eucalyptus grandis
Eucgr.L02201 2.0kb downstream 2.0kb downstream 1827 true scaffold_667: 1-1827 Eucalyptus grandis
Eucgr.L02201 2.0kb downstream 2.0kb downstream 45 false scaffold_667: 1-45 Eucalyptus grandis
Eucgr.L02201 5.0kb upstream 5.0kb upstream 6782 true scaffold_667: 46-6827 Eucalyptus grandis
Eucgr.L02201 5.0kb upstream 5.0kb upstream 5000 false scaffold_667: 1828-6827 Eucalyptus grandis
Eucgr.L02201 5.0kb downstream 5.0kb downstream 1827 true scaffold_667: 1-1827 Eucalyptus grandis
Eucgr.L02201 5.0kb downstream 5.0kb downstream 45 false scaffold_667: 1-45 Eucalyptus grandis
Eucgr.L02201 10.0kb upstream 10.0kb upstream 11782 true scaffold_667: 46-11827 Eucalyptus grandis
Eucgr.L02201 10.0kb upstream 10.0kb upstream 10000 false scaffold_667: 1828-11827 Eucalyptus grandis
Eucgr.L02201 10.0kb downstream 10.0kb downstream 1827 true scaffold_667: 1-1827 Eucalyptus grandis
Eucgr.L02201 10.0kb downstream 10.0kb downstream 45 false scaffold_667: 1-45 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075813 5270 Rosid View MSA
123753355 5271 Pentapetalae View MSA
122797864 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.81981 0.0 16.9613    
cufflinks 7.46597 0.0 18.3012    
cufflinks 11.7026 0.0 27.5878    
cufflinks 13.0802 0.0 30.485    
cufflinks 48.5355 0.0 107.339 High High
cufflinks 5.21241 0.0 13.3508    

0 Strain