Gene : Eucgr.L02059 E. grandis v2.0
Defline:  (1 of 2) PTHR11802//PTHR11802:SF110 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Genomic Order:  1
Name:  ? Eucgr.L02059 Secondary Identifier:  ? PAC:32027554
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02059 0.5kb upstream 0.5kb upstream 4251 true scaffold_552: 147-4397 Eucalyptus grandis
Eucgr.L02059 0.5kb upstream 0.5kb upstream 500 false scaffold_552: 147-646 Eucalyptus grandis
Eucgr.L02059 0.5kb downstream 0.5kb downstream 4251 true scaffold_552: 647-4897 Eucalyptus grandis
Eucgr.L02059 0.5kb downstream 0.5kb downstream 500 false scaffold_552: 4398-4897 Eucalyptus grandis
Eucgr.L02059 1.0kb upstream 1.0kb upstream 4397 true scaffold_552: 1-4397 Eucalyptus grandis
Eucgr.L02059 1.0kb upstream 1.0kb upstream 646 false scaffold_552: 1-646 Eucalyptus grandis
Eucgr.L02059 1.0kb downstream 1.0kb downstream 4751 true scaffold_552: 647-5397 Eucalyptus grandis
Eucgr.L02059 1.0kb downstream 1.0kb downstream 1000 false scaffold_552: 4398-5397 Eucalyptus grandis
Eucgr.L02059 2.0kb upstream 2.0kb upstream 4397 true scaffold_552: 1-4397 Eucalyptus grandis
Eucgr.L02059 2.0kb upstream 2.0kb upstream 646 false scaffold_552: 1-646 Eucalyptus grandis
Eucgr.L02059 2.0kb downstream 2.0kb downstream 5751 true scaffold_552: 647-6397 Eucalyptus grandis
Eucgr.L02059 2.0kb downstream 2.0kb downstream 2000 false scaffold_552: 4398-6397 Eucalyptus grandis
Eucgr.L02059 5.0kb upstream 5.0kb upstream 4397 true scaffold_552: 1-4397 Eucalyptus grandis
Eucgr.L02059 5.0kb upstream 5.0kb upstream 646 false scaffold_552: 1-646 Eucalyptus grandis
Eucgr.L02059 5.0kb downstream 5.0kb downstream 8751 true scaffold_552: 647-9397 Eucalyptus grandis
Eucgr.L02059 5.0kb downstream 5.0kb downstream 5000 false scaffold_552: 4398-9397 Eucalyptus grandis
Eucgr.L02059 10.0kb upstream 10.0kb upstream 4397 true scaffold_552: 1-4397 Eucalyptus grandis
Eucgr.L02059 10.0kb upstream 10.0kb upstream 646 false scaffold_552: 1-646 Eucalyptus grandis
Eucgr.L02059 10.0kb downstream 10.0kb downstream 13751 true scaffold_552: 647-14397 Eucalyptus grandis
Eucgr.L02059 10.0kb downstream 10.0kb downstream 10000 false scaffold_552: 4398-14397 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070950 5270 Rosid View MSA
123753218 5271 Pentapetalae View MSA
122797731 5272 Eudicot View MSA
122048789 5273 Angiosperm View MSA
121311114 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.391903 0.0 1.26699 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.380517 0.0 1.23411    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.409795 0.0 1.32011 Low High

0 Strain