Gene : Eucgr.L02072 E. grandis v2.0
Defline:  (1 of 2) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC Genomic Order:  1
Name:  ? Eucgr.L02072 Secondary Identifier:  ? PAC:32073618
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02072 0.5kb upstream 0.5kb upstream 12409 true scaffold_561: 35185-47593 Eucalyptus grandis
Eucgr.L02072 0.5kb upstream 0.5kb upstream 500 false scaffold_561: 35185-35684 Eucalyptus grandis
Eucgr.L02072 0.5kb downstream 0.5kb downstream 12409 true scaffold_561: 35685-48093 Eucalyptus grandis
Eucgr.L02072 0.5kb downstream 0.5kb downstream 500 false scaffold_561: 47594-48093 Eucalyptus grandis
Eucgr.L02072 1.0kb upstream 1.0kb upstream 12909 true scaffold_561: 34685-47593 Eucalyptus grandis
Eucgr.L02072 1.0kb upstream 1.0kb upstream 1000 false scaffold_561: 34685-35684 Eucalyptus grandis
Eucgr.L02072 1.0kb downstream 1.0kb downstream 12909 true scaffold_561: 35685-48593 Eucalyptus grandis
Eucgr.L02072 1.0kb downstream 1.0kb downstream 1000 false scaffold_561: 47594-48593 Eucalyptus grandis
Eucgr.L02072 2.0kb upstream 2.0kb upstream 13909 true scaffold_561: 33685-47593 Eucalyptus grandis
Eucgr.L02072 2.0kb upstream 2.0kb upstream 2000 false scaffold_561: 33685-35684 Eucalyptus grandis
Eucgr.L02072 2.0kb downstream 2.0kb downstream 13909 true scaffold_561: 35685-49593 Eucalyptus grandis
Eucgr.L02072 2.0kb downstream 2.0kb downstream 2000 false scaffold_561: 47594-49593 Eucalyptus grandis
Eucgr.L02072 5.0kb upstream 5.0kb upstream 16909 true scaffold_561: 30685-47593 Eucalyptus grandis
Eucgr.L02072 5.0kb upstream 5.0kb upstream 5000 false scaffold_561: 30685-35684 Eucalyptus grandis
Eucgr.L02072 5.0kb downstream 5.0kb downstream 14629 true scaffold_561: 35685-50313 Eucalyptus grandis
Eucgr.L02072 5.0kb downstream 5.0kb downstream 2720 false scaffold_561: 47594-50313 Eucalyptus grandis
Eucgr.L02072 10.0kb upstream 10.0kb upstream 21909 true scaffold_561: 25685-47593 Eucalyptus grandis
Eucgr.L02072 10.0kb upstream 10.0kb upstream 10000 false scaffold_561: 25685-35684 Eucalyptus grandis
Eucgr.L02072 10.0kb downstream 10.0kb downstream 14629 true scaffold_561: 35685-50313 Eucalyptus grandis
Eucgr.L02072 10.0kb downstream 10.0kb downstream 2720 false scaffold_561: 47594-50313 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069438 5270 Rosid View MSA
123746300 5271 Pentapetalae View MSA
122793106 5272 Eudicot View MSA
122044524 5273 Angiosperm View MSA
123429293 5275 Viridiplantae View MSA
121310306 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.05684 0.0 5.41601    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.31669 0.0 3.60654    
cufflinks 0.0934981 0.0 0.352276 Low Low
cufflinks 0.351861 0.0 1.11753 Low  
cufflinks 4.59061 0.0 11.1882   High

0 Strain