Gene : Eucgr.L00796 E. grandis v2.0
Defline:  (1 of 21) PTHR23070:SF5 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  5
Name:  ? Eucgr.L00796 Secondary Identifier:  ? PAC:32065812
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00796 0.5kb upstream 0.5kb upstream 1454 true scaffold_54: 86710-88163 Eucalyptus grandis
Eucgr.L00796 0.5kb upstream 0.5kb upstream 500 false scaffold_54: 87664-88163 Eucalyptus grandis
Eucgr.L00796 0.5kb downstream 0.5kb downstream 1454 true scaffold_54: 86210-87663 Eucalyptus grandis
Eucgr.L00796 0.5kb downstream 0.5kb downstream 500 false scaffold_54: 86210-86709 Eucalyptus grandis
Eucgr.L00796 1.0kb upstream 1.0kb upstream 1954 true scaffold_54: 86710-88663 Eucalyptus grandis
Eucgr.L00796 1.0kb upstream 1.0kb upstream 1000 false scaffold_54: 87664-88663 Eucalyptus grandis
Eucgr.L00796 1.0kb downstream 1.0kb downstream 1954 true scaffold_54: 85710-87663 Eucalyptus grandis
Eucgr.L00796 1.0kb downstream 1.0kb downstream 1000 false scaffold_54: 85710-86709 Eucalyptus grandis
Eucgr.L00796 2.0kb upstream 2.0kb upstream 2954 true scaffold_54: 86710-89663 Eucalyptus grandis
Eucgr.L00796 2.0kb upstream 2.0kb upstream 2000 false scaffold_54: 87664-89663 Eucalyptus grandis
Eucgr.L00796 2.0kb downstream 2.0kb downstream 2954 true scaffold_54: 84710-87663 Eucalyptus grandis
Eucgr.L00796 2.0kb downstream 2.0kb downstream 2000 false scaffold_54: 84710-86709 Eucalyptus grandis
Eucgr.L00796 5.0kb upstream 5.0kb upstream 5954 true scaffold_54: 86710-92663 Eucalyptus grandis
Eucgr.L00796 5.0kb upstream 5.0kb upstream 5000 false scaffold_54: 87664-92663 Eucalyptus grandis
Eucgr.L00796 5.0kb downstream 5.0kb downstream 5954 true scaffold_54: 81710-87663 Eucalyptus grandis
Eucgr.L00796 5.0kb downstream 5.0kb downstream 5000 false scaffold_54: 81710-86709 Eucalyptus grandis
Eucgr.L00796 10.0kb upstream 10.0kb upstream 10954 true scaffold_54: 86710-97663 Eucalyptus grandis
Eucgr.L00796 10.0kb upstream 10.0kb upstream 10000 false scaffold_54: 87664-97663 Eucalyptus grandis
Eucgr.L00796 10.0kb downstream 10.0kb downstream 10954 true scaffold_54: 76710-87663 Eucalyptus grandis
Eucgr.L00796 10.0kb downstream 10.0kb downstream 10000 false scaffold_54: 76710-86709 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074600 5270 Rosid View MSA
123749775 5271 Pentapetalae View MSA
122796053 5272 Eudicot View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.48984 0.0 6.88025    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain