Protein Domain : IPR001569

Type:  Family Name:  Ribosomal protein L37e
Description:  Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ].A number of eukaryotic and archaeal ribosomal proteins can be grouped on the basis of sequence similarities. One of these families consists of proteins of 56 to 96 amino-acid residues that share a highly conserved region located in the N-terminal part. Short Name:  Ribosomal_L37e

0 Child Features

1 Contains

DB identifier Type Name
IPR018267 Conserved_site Ribosomal protein L37e, conserved site

4 Cross Referencess

Identifier
PTHR10768
PF01907
PD005132
MF_00547

0 Found In

4 GO Annotations

GO Term Gene Name
GO:0003735 IPR001569
GO:0006412 IPR001569
GO:0005622 IPR001569
GO:0005840 IPR001569

4 Ontology Annotations

GO Term Gene Name
GO:0003735 IPR001569
GO:0006412 IPR001569
GO:0005622 IPR001569
GO:0005840 IPR001569

0 Parent Features

997 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
81515 D8QZS4 PAC:15408940 Selaginella moellendorffii 97  
evm.model.supercontig_78.85 PAC:16426266 Carica papaya 69  
evm.model.supercontig_78.86 PAC:16426267 Carica papaya 109  
evm.model.supercontig_98.18 PAC:16429174 Carica papaya 94  
29794.m003459 B9RS60 PAC:16808818 Ricinus communis 96  
29912.m005519 B9RKQ7 PAC:16813394 Ricinus communis 90  
30146.m003595 B9RQN1 PAC:16819715 Ricinus communis 96  
30169.m006501 B9RII7 PAC:16821301 Ricinus communis 162  
Cucsa.062030.1 A0A0A0L819 PAC:16954948 Cucumis sativus 95  
Cucsa.359150.2 A0A0A0K941 PAC:16980528 Cucumis sativus 95  
Cucsa.359150.1 PAC:16980527 Cucumis sativus 122  
orange1.1g034400m A0A067F063 PAC:18120832 Citrus sinensis 95  
orange1.1g034411m A0A067GWC6 PAC:18096821 Citrus sinensis 95  
AT3G16080.1 Q8LEM8 PAC:19660052 Arabidopsis thaliana 95  
AT1G15250.1 Q8LFH7 PAC:19649181 Arabidopsis thaliana 95  
AT1G52300.1 Q43292 PAC:19656996 Arabidopsis thaliana 95  
Thhalv10021833m V4NP70 PAC:20182556 Eutrema salsugineum 95  
Thhalv10011894m V4KS92 PAC:20184183 Eutrema salsugineum 95  
Ciclev10026841m V4SSW5 PAC:20799774 Citrus clementina 95  
Ciclev10010027m V4WBU5 PAC:20794292 Citrus clementina 95  
Ciclev10010353m V4UE96 PAC:20795044 Citrus clementina 79  
Ciclev10033291m V4SRA8 PAC:20804237 Citrus clementina 63  
Lus10011446 PAC:23182605 Linum usitatissimum 96  
Lus10037549 PAC:23167189 Linum usitatissimum 96  
Lus10035878 PAC:23140991 Linum usitatissimum 183  
Potri.001G183200.1 A9PFX5 PAC:27048203 Populus trichocarpa 95  
Potri.001G183200.2 PAC:27048204 Populus trichocarpa 82  
Potri.003G053100.1 A9PBK5 PAC:26997944 Populus trichocarpa 95  
Potri.018G036900.1 A9PBN7 PAC:27011253 Populus trichocarpa 96  
Potri.006G243300.6 PAC:27006255 Populus trichocarpa 97  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11297922
            11290319
            11114498