Protein Domain : IPR009029

Type:  Domain Name:  Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain
Description:  There are two distinct classes of hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase enzymes: class I consists of eukaryotic and most archaeal enzymes (), while class II consists of prokaryotic enzymes () [, ].Class I HMG-CoA reductases catalyse the NADP-dependent synthesis of mevalonate from 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA). In vertebrates, membrane-bound HMG-CoA reductase is the rate-limiting enzyme in the biosynthesis of cholesterol and other isoprenoids. In plants, mevalonate is the precursor of all isoprenoid compounds []. The reduction of HMG-CoA to mevalonate is regulated by feedback inhibition by sterols and non-sterol metabolites derived from mevalonate, including cholesterol. In archaea, HMG-CoA reductase is a cytoplasmic enzyme involved in the biosynthesis of the isoprenoids side chains of lipids []. Class I HMG-CoA reductases consist of an N-terminal membrane domain (lacking in archaeal enzymes), and a C-terminal catalytic region. The catalytic region can be subdivided into three domains: an N-domain (N-terminal), a large L-domain, and a small S-domain (inserted within the L-domain). The L-domain binds the substrate, while the S-domain binds NADP.Class II HMG-CoA reductases catalyse the reverse reaction of class I enzymes, namely the NAD-dependent synthesis of HMG-CoA from mevalonate and CoA []. Some bacteria, such as Pseudomonas mevalonii, can use mevalonate as the sole carbon source. Class II enzymes lack a membrane domain. Their catalytic region is structurally related to that of class I enzymes, but it consists of only two domains: a large L-domain and a small S-domain (inserted within the L-domain). As with class I enzymes, the L-domain binds substrate, but the S-domain binds NAD (instead of NADP in class I).This entry represents the substrate-binding L-domain found in class I and II enzymes. The L-domain has the same structural fold in both classes of enzymes, and is unique to HMG-CoA reductases. Its topology resembles a prism, with a central alpha helix surrounded by three alpha/beta subdomains forming three roughly triangular walls [, ]. Short Name:  HMG_CoA_Rdtase_sub-bd_dom

0 Child Features

0 Contains

1 Cross References

Identifier
SSF56542

4 Found Ins

DB identifier Type Name
IPR002202 Family Hydroxymethylglutaryl-CoA reductase, class I/II
IPR004554 Family Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type
IPR004553 Family Hydroxymethylglutaryl-CoA reductase, bacterial-type
IPR004816 Family Hydroxymethylglutaryl-CoA reductase, metazoan

4 GO Annotations

GO Term Gene Name
GO:0016616 IPR009029
GO:0050662 IPR009029
GO:0015936 IPR009029
GO:0055114 IPR009029

4 Ontology Annotations

GO Term Gene Name
GO:0016616 IPR009029
GO:0050662 IPR009029
GO:0015936 IPR009029
GO:0055114 IPR009029

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
177513 D8S768 PAC:15404745 Selaginella moellendorffii 554  
evm.model.supercontig_232.9 PAC:16414353 Carica papaya 565  
evm.model.supercontig_26.7 PAC:16415313 Carica papaya 572  
evm.model.supercontig_6.348 PAC:16423540 Carica papaya 539  
30162.m001288 B9RKY1 PAC:16820965 Ricinus communis 586  
30170.m013805 B9R8T9 PAC:16821650 Ricinus communis 576  
30987.m000015 B9TFK3 PAC:16824744 Ricinus communis 432  
29682.m000571 B9SRA2 PAC:16805663 Ricinus communis 576  
Cucsa.005280.1 A0A0A0KFZ5 PAC:16951116 Cucumis sativus 590  
Cucsa.099940.1 A0A0A0K2Z2 PAC:16958497 Cucumis sativus 582  
Cucsa.119980.1 PAC:16961063 Cucumis sativus 597  
orange1.1g007956m A0A067DH93 PAC:18101346 Citrus sinensis 583  
orange1.1g011933m A0A067HBX8 PAC:18092538 Citrus sinensis 474  
orange1.1g011423m A0A067H2X2 PAC:18092537 Citrus sinensis 486  
orange1.1g016586m A0A067HBP5 PAC:18092539 Citrus sinensis 387  
AT1G76490.1 P14891 PAC:19649404 Arabidopsis thaliana 642  
AT2G17370.1 P43256 PAC:19643585 Arabidopsis thaliana 562  
Thhalv10022614m V4M3J1 PAC:20202299 Eutrema salsugineum 582  
Thhalv10018320m V4K8Y1 PAC:20191897 Eutrema salsugineum 594  
Thhalv10018592m V4KJN7 PAC:20191898 Eutrema salsugineum 431  
Ciclev10001465m V4SLS3 PAC:20785670 Citrus clementina 387  
Ciclev10000761m V4V960 PAC:20785669 Citrus clementina 550  
Ciclev10028082m V4S5H8 PAC:20812626 Citrus clementina 583  
Lus10026567 PAC:23164258 Linum usitatissimum 419  
Lus10013850 PAC:23159506 Linum usitatissimum 419  
Potri.011G145000.1 B9I0K7 PAC:27002806 Populus trichocarpa 588  
Potri.009G169900.2 A0A2K1Z962 PAC:26986880 Populus trichocarpa 589  
Potri.009G169900.1 A0A2K1Z962 PAC:26986881 Populus trichocarpa 589  
Potri.001G457000.1 B9GJZ3 PAC:27046028 Populus trichocarpa 577  
Potri.002G004000.2 A0A2K2BBB2 PAC:27023709 Populus trichocarpa 588  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15535874
            10068515
            10600463
            15028676
            10698924
            10377386