Gene : Prupe.6G024600 P. persica v2.1
Defline:  (1 of 8) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  246
Name:  ? Prupe.6G024600 Secondary Identifier:  ? PAC:32084462
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Prupe.6G024600 0.5kb upstream 0.5kb upstream 3811 true Pp06: 1980329-1984139 Prunus persica
Prupe.6G024600 0.5kb upstream 0.5kb upstream 500 false Pp06: 1980329-1980828 Prunus persica
Prupe.6G024600 0.5kb downstream 0.5kb downstream 3811 true Pp06: 1980829-1984639 Prunus persica
Prupe.6G024600 0.5kb downstream 0.5kb downstream 500 false Pp06: 1984140-1984639 Prunus persica
Prupe.6G024600 1.0kb upstream 1.0kb upstream 4311 true Pp06: 1979829-1984139 Prunus persica
Prupe.6G024600 1.0kb upstream 1.0kb upstream 1000 false Pp06: 1979829-1980828 Prunus persica
Prupe.6G024600 1.0kb downstream 1.0kb downstream 4311 true Pp06: 1980829-1985139 Prunus persica
Prupe.6G024600 1.0kb downstream 1.0kb downstream 1000 false Pp06: 1984140-1985139 Prunus persica
Prupe.6G024600 2.0kb upstream 2.0kb upstream 5311 true Pp06: 1978829-1984139 Prunus persica
Prupe.6G024600 2.0kb upstream 2.0kb upstream 2000 false Pp06: 1978829-1980828 Prunus persica
Prupe.6G024600 2.0kb downstream 2.0kb downstream 5311 true Pp06: 1980829-1986139 Prunus persica
Prupe.6G024600 2.0kb downstream 2.0kb downstream 2000 false Pp06: 1984140-1986139 Prunus persica
Prupe.6G024600 5.0kb upstream 5.0kb upstream 8311 true Pp06: 1975829-1984139 Prunus persica
Prupe.6G024600 5.0kb upstream 5.0kb upstream 5000 false Pp06: 1975829-1980828 Prunus persica
Prupe.6G024600 5.0kb downstream 5.0kb downstream 8311 true Pp06: 1980829-1989139 Prunus persica
Prupe.6G024600 5.0kb downstream 5.0kb downstream 5000 false Pp06: 1984140-1989139 Prunus persica
Prupe.6G024600 10.0kb upstream 10.0kb upstream 13311 true Pp06: 1970829-1984139 Prunus persica
Prupe.6G024600 10.0kb upstream 10.0kb upstream 10000 false Pp06: 1970829-1980828 Prunus persica
Prupe.6G024600 10.0kb downstream 10.0kb downstream 13311 true Pp06: 1980829-1994139 Prunus persica
Prupe.6G024600 10.0kb downstream 10.0kb downstream 10000 false Pp06: 1984140-1994139 Prunus persica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312019 5265 Fabidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain