Gene : Prupe.4G013100 P. persica v2.1
Defline:  (1 of 8) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  131
Name:  ? Prupe.4G013100 Secondary Identifier:  ? PAC:32094561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Prupe.4G013100 0.5kb upstream 0.5kb upstream 1359 true Pp04: 616089-617447 Prunus persica
Prupe.4G013100 0.5kb upstream 0.5kb upstream 500 false Pp04: 616948-617447 Prunus persica
Prupe.4G013100 0.5kb downstream 0.5kb downstream 1359 true Pp04: 615589-616947 Prunus persica
Prupe.4G013100 0.5kb downstream 0.5kb downstream 500 false Pp04: 615589-616088 Prunus persica
Prupe.4G013100 1.0kb upstream 1.0kb upstream 1859 true Pp04: 616089-617947 Prunus persica
Prupe.4G013100 1.0kb upstream 1.0kb upstream 1000 false Pp04: 616948-617947 Prunus persica
Prupe.4G013100 1.0kb downstream 1.0kb downstream 1859 true Pp04: 615089-616947 Prunus persica
Prupe.4G013100 1.0kb downstream 1.0kb downstream 1000 false Pp04: 615089-616088 Prunus persica
Prupe.4G013100 2.0kb upstream 2.0kb upstream 2859 true Pp04: 616089-618947 Prunus persica
Prupe.4G013100 2.0kb upstream 2.0kb upstream 2000 false Pp04: 616948-618947 Prunus persica
Prupe.4G013100 2.0kb downstream 2.0kb downstream 2859 true Pp04: 614089-616947 Prunus persica
Prupe.4G013100 2.0kb downstream 2.0kb downstream 2000 false Pp04: 614089-616088 Prunus persica
Prupe.4G013100 5.0kb upstream 5.0kb upstream 5859 true Pp04: 616089-621947 Prunus persica
Prupe.4G013100 5.0kb upstream 5.0kb upstream 5000 false Pp04: 616948-621947 Prunus persica
Prupe.4G013100 5.0kb downstream 5.0kb downstream 5859 true Pp04: 611089-616947 Prunus persica
Prupe.4G013100 5.0kb downstream 5.0kb downstream 5000 false Pp04: 611089-616088 Prunus persica
Prupe.4G013100 10.0kb upstream 10.0kb upstream 10859 true Pp04: 616089-626947 Prunus persica
Prupe.4G013100 10.0kb upstream 10.0kb upstream 10000 false Pp04: 616948-626947 Prunus persica
Prupe.4G013100 10.0kb downstream 10.0kb downstream 10859 true Pp04: 606089-616947 Prunus persica
Prupe.4G013100 10.0kb downstream 10.0kb downstream 10000 false Pp04: 606089-616088 Prunus persica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309341 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain