Gene : Prupe.3G013200 P. persica v2.1
Defline:  (1 of 1) PTHR31480:SF2 - PHYTOENE SYNTHASE, CHLOROPLASTIC Genomic Order:  132
Name:  ? Prupe.3G013200 Secondary Identifier:  ? PAC:32108187
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppersica CAROTENOID-PWY Prunus persica pathologic  
Ppersica PWY-6475 Prunus persica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Prupe.3G013200 0.5kb upstream 0.5kb upstream 4917 true Pp03: 937928-942844 Prunus persica
Prupe.3G013200 0.5kb upstream 0.5kb upstream 500 false Pp03: 937928-938427 Prunus persica
Prupe.3G013200 0.5kb downstream 0.5kb downstream 4917 true Pp03: 938428-943344 Prunus persica
Prupe.3G013200 0.5kb downstream 0.5kb downstream 500 false Pp03: 942845-943344 Prunus persica
Prupe.3G013200 1.0kb upstream 1.0kb upstream 5417 true Pp03: 937428-942844 Prunus persica
Prupe.3G013200 1.0kb upstream 1.0kb upstream 1000 false Pp03: 937428-938427 Prunus persica
Prupe.3G013200 1.0kb downstream 1.0kb downstream 5417 true Pp03: 938428-943844 Prunus persica
Prupe.3G013200 1.0kb downstream 1.0kb downstream 1000 false Pp03: 942845-943844 Prunus persica
Prupe.3G013200 2.0kb upstream 2.0kb upstream 6417 true Pp03: 936428-942844 Prunus persica
Prupe.3G013200 2.0kb upstream 2.0kb upstream 2000 false Pp03: 936428-938427 Prunus persica
Prupe.3G013200 2.0kb downstream 2.0kb downstream 6417 true Pp03: 938428-944844 Prunus persica
Prupe.3G013200 2.0kb downstream 2.0kb downstream 2000 false Pp03: 942845-944844 Prunus persica
Prupe.3G013200 5.0kb upstream 5.0kb upstream 9417 true Pp03: 933428-942844 Prunus persica
Prupe.3G013200 5.0kb upstream 5.0kb upstream 5000 false Pp03: 933428-938427 Prunus persica
Prupe.3G013200 5.0kb downstream 5.0kb downstream 9417 true Pp03: 938428-947844 Prunus persica
Prupe.3G013200 5.0kb downstream 5.0kb downstream 5000 false Pp03: 942845-947844 Prunus persica
Prupe.3G013200 10.0kb upstream 10.0kb upstream 14417 true Pp03: 928428-942844 Prunus persica
Prupe.3G013200 10.0kb upstream 10.0kb upstream 10000 false Pp03: 928428-938427 Prunus persica
Prupe.3G013200 10.0kb downstream 10.0kb downstream 14417 true Pp03: 938428-952844 Prunus persica
Prupe.3G013200 10.0kb downstream 10.0kb downstream 10000 false Pp03: 942845-952844 Prunus persica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122301582 5265 Fabidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain